Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0226 |
Symbol | |
ID | 3719405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 1944352 |
End bp | 1945401 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640071433 |
Product | naringenin-chalcone synthase |
Protein accession | YP_353298 |
Protein GI | 77463794 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3424] Predicted naringenin-chalcone synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.239873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCGAC CAGTCAGCCT CGCCTCCCTC GCAACCGCCG TGCCTCCCCA TCGCGTCACC CAACGCGAGG CGGCGGAGGC CGCCCATGGC GGCTTCGCGG CCCGCTACGA CGATTTCGCC CGCCTTGCGG CCGTGTTCGA GACCTCGGGG ATCCGCACCC GTCATCTGGT GCGCCCGGTC GAATGGTATC TGCAACCGCT CGGCTGGGAG GCCCGCAACG CCGCCTATCT CGAAGCAGCA GAGGCCCTGT TCATCGAGGC CGCCACCGCC GCACTCGAAC GGGCCTCGCT GAGCGCGGCC GAGGTGGACA CGGTGGTGAC GATCTCCTCG ACCGGAATCG CCACGCCCAG TCTCGAGGCG CGCGTGGCCG ACAGGATGGG GTTCCGGAGC GACCTCGAAC GCGTCCCGGT CTTCGGCCTC GGCTGCGCGG GCGGCGTCTC CGGGCTCGGC CTCGGGGCAC GCCTCGCCGC CGCGCGGCCG GGCAGCACCG TCCTCGTCGT GGCGGTCGAG CTCTGCTCGC TGTCATTCCG GCTCGACCGG CTGACGAAGG AGAACATCGT CGCGACGGCG CTGTTCGCCG ACGGGGCGGC AGCCGCGGTG CTGCGGGCCG TCGACGGGCC GCTGACGGTC GAGATGGCGG GCCAGCACTC CTGGCCGCAG ACGCTCGACA TCATGGGCTG GCATGTCGAC GACGGCGGGC TCGGCGTGAT CTTCGACCGG GCGATCCCGC CCTTCGCCGA GGCCCATGTG GCAGGGGCCA TCGAGGCGAT CCTCGGCCGC GCGGGGCTGA CGCGGGCGGA GGTCGACCGC TTTGCCTGCC ATCCCGGCGG AGCCAAGGTC ATCACGGCGC TCGAACGCTC CCTGTCGCTC GAGCAGGGCA CGCTCGATCA CGAGCGCGAG GTGCTGGCCC AGAATGGCAA CATGTCCGCG CCGACCGCTC TCTTCGTGCT CGCGCGCGTG CTGAACGCCG AGCCGCCACC CCGCACCCTC CTCACCGCGA TGGGGCCGGG CTTCACCGCC AGCTGCGTCT CGCTTCAGGC GGCGGCATGA
|
Protein sequence | MPRPVSLASL ATAVPPHRVT QREAAEAAHG GFAARYDDFA RLAAVFETSG IRTRHLVRPV EWYLQPLGWE ARNAAYLEAA EALFIEAATA ALERASLSAA EVDTVVTISS TGIATPSLEA RVADRMGFRS DLERVPVFGL GCAGGVSGLG LGARLAAARP GSTVLVVAVE LCSLSFRLDR LTKENIVATA LFADGAAAAV LRAVDGPLTV EMAGQHSWPQ TLDIMGWHVD DGGLGVIFDR AIPPFAEAHV AGAIEAILGR AGLTRAEVDR FACHPGGAKV ITALERSLSL EQGTLDHERE VLAQNGNMSA PTALFVLARV LNAEPPPRTL LTAMGPGFTA SCVSLQAAA
|
| |