| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0160 |
|---|
| Symbol | |
|---|
| ID | 3719545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | - |
|---|
| Start bp | 1875827 |
|---|
| End bp | 1876864 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640071366 |
|---|
| Product | NAD-dependent epimerase/dehydratase family protein |
|---|
| Protein accession | YP_353234 |
|---|
| Protein GI | 77463730 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.177339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGAA GCCTTATTCC GGTCGATGTG ACCGGTCATG ATTCTTTTAT GCCTCGTTTC
CATCGCCGGA AGGTCATTCT CGTCACGGGA GGAGCCGGTT TTGTTGGCTC TCATCTTTGC
GAGCGGCTGA TTGCCGAGGG CCATTCCGTC GTCTGTCTCG ATAATCTTCT GACCGGCCGC
AAAGAGAATG TCGCTGGGCT GCTCGATCAT CCCCAATTCC GCTTTCTCGA GCAGGACATC
CTGAACCGGA TCGACTGGCA GGGGCCGCTG GACGAGATCT ACAACCTTGC CTGCGCGGCC
TCTCCGCCGC TCTACCAGCG CGATCCGATC CATACGTTCC GCACCTGCAC CGAGGGCGTG
CTGAACCTGC TCGCGCTGGC GCGGGCCACG GGCGCGCGCA TCCTCCAGGC CTCGACCTCC
GAGGTCTATG GCGATCCCGA GATCTCGCCC CAGCACGAGG GCTACCGCGG CTGCGTCAAT
ACGGTGGGCC CGCGGGCCTG CTACGACGAG GGCAAACGCG CGGCCGAGAC CCTGTTCTGG
GAGTTCGGCG CCCATCAGGG CCTCGAGGTG CGGATCGCGC GGATCTTCAA CACCTACGGG
CCGCGGATGA GCCCCGAGGA CGGCCGGGTC GTGTCGAACT TCATCGTCCA GGCGCTGACC
CGCAGCGACA TCACCCTCTA TGGCGACGGG ATGCAGACGC GCTCCTTCTG CTATGTGGAC
GATCTGGTGG CCGGACTGAT GGCGCTGATG GCGTCGGAGG TGAGCGAGCC GGTCAACCTC
GGCAATCCGG GCGAGTTCAC CATGCGCGAG CTGGCCGAGA TGGTGCTGAC TCAGACCGGC
TCTTCCTCGC GGCTGGTCCA TCGGCCGCTG CCGGTCGACG ATCCGCGCCA GCGCCGGCCC
GACATCGCGC AGGCGGCGCG GCTCCTCGGC TGGGCGCCGA CGGTGCCGCT GGCCGAAGGC
ATCGCCCGGA CCATCCGGCA TTTCGCGGGC GAACCTCAGG TCGTCCGGGC GCGCGAGGCT
CTGCTGGTCC ATGCCTGA
|
|---|
| Protein sequence | MDGSLIPVDV TGHDSFMPRF HRRKVILVTG GAGFVGSHLC ERLIAEGHSV VCLDNLLTGR
KENVAGLLDH PQFRFLEQDI LNRIDWQGPL DEIYNLACAA SPPLYQRDPI HTFRTCTEGV
LNLLALARAT GARILQASTS EVYGDPEISP QHEGYRGCVN TVGPRACYDE GKRAAETLFW
EFGAHQGLEV RIARIFNTYG PRMSPEDGRV VSNFIVQALT RSDITLYGDG MQTRSFCYVD
DLVAGLMALM ASEVSEPVNL GNPGEFTMRE LAEMVLTQTG SSSRLVHRPL PVDDPRQRRP
DIAQAARLLG WAPTVPLAEG IARTIRHFAG EPQVVRAREA LLVHA
|
|---|
| |