Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0123 |
Symbol | cerI |
ID | 3719690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 1837350 |
End bp | 1837982 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640071327 |
Product | autoinducer synthesis protein |
Protein accession | YP_353199 |
Protein GI | 77463695 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTCA TTATCGACTC GCTCAACCTC CGCGAGCACG CAGACATCGT GAAGGACATG TTCCGGTTGC GCAAGCGCGT TTTTGCGGAC CGTCTCGGCT GGGACGTTCA GATTTCGCAG GGCATGGAGC GCGACCGCTT CGACGACCTG GATCCGGCTC ACGTCGTGAG CGTGGATGAC GAGGGCCGCG TGGTCGGCTG CATGCGCCTG CTTCAGACGA CGGGCCCGCA CATGCTCTCC GACGTGTTCA GCTCGATCCT GGACGGAGAG CCTCCGCTGC GCAGCGCAAC TCTCTGGGAA GCCACGCGCT TCTGTGTCGA CACCGACCGC CTGGTTTCGG GCCGCGCCCG CAATTCGATC GCCTATGTCA CGAGCGAAGT GATGATCGGC GCCTTCGAAT TCGCCATGTC GGCGGGTGTG ACCGATGCGG TCGCCGTGAT CGATCCGGTG ATGGACCGCG TGCTGAAGCG GTCGGGCAAT GCGCCGCAGG GCTATGTCGG CACGCCGAAG CCGATGGGCA AGGTGACGGC TCTGGCCGCG CTGATGGACT GCTCGGAAGA GCGTGTGAAG CGCATCCGCG ATTTCGCCGG CATCTACCAC GACGTGACGC AACCGCAGAC GGTCATCGCC TGA
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Protein sequence | MIFIIDSLNL REHADIVKDM FRLRKRVFAD RLGWDVQISQ GMERDRFDDL DPAHVVSVDD EGRVVGCMRL LQTTGPHMLS DVFSSILDGE PPLRSATLWE ATRFCVDTDR LVSGRARNSI AYVTSEVMIG AFEFAMSAGV TDAVAVIDPV MDRVLKRSGN APQGYVGTPK PMGKVTALAA LMDCSEERVK RIRDFAGIYH DVTQPQTVIA
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