| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0117 |
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| Symbol | |
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| ID | 3719720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 1830270 |
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| End bp | 1832843 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640071320 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_353192 |
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| Protein GI | 77463688 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAG TCCGCGACAC CGACGCGCCG GTTCCCGAAG GTCCCTTTCC GCCGACCGAG
GCCATGCTCG CCGAGCCGGT GCCGACCGAG GTCGCCGAGG CGCAGGCCGA CCGGCTGCGC
CGGGTCTGGG CGACACCCAA AGGCTGGCGC TACTGGTCGG CGGTGAACAA CACCGAGGTG
GGCGTCTGGT ATGCCCTGAC GGCGCTCGCC TTCATGCTCT GCGCGGGCGT GCTGGCGCTG
CTGATGCGGG TGCAGCTCGC CGTGCCCCAC AACGACTTCC TCTCGGCCGA CCGGTTCAAC
CAGTTCTTCA CGATGCACGG CTCGGCGATG ATGTTCCTCT TCGCCGTTCC GATGTTCGAG
GCGATCTCGA TCATCCTGCT GCCCTCGCTT CTGGGCGCGC GGGACCTGCC GTTCCCGCGC
CTGTCGGCCT ATGGCTACTG GTGCTTCCTG ATCGGGGGCG TCTTCGTGCT GGGCTCGATC
CTGTTCGATG CGGCGCCTCG CTCGGGCTGG TTCATGTATC CGCCGCTCGC CACGCAGGAC
GAGGGGCTGG GCTCGGACAT CTGGCTTCTG GGCCTGTCCT TCATCGAGGT GGCCTCGATC
GCCGCCGCAG TCGAGCTGAT CGTGGGCGTG TTGAAGTGCC GCCCGCCGGG GATGCGCGTC
AATCTGATGC CGCTCTACGC TTGGTATGTG CTGGTCGTGG GCGGCATGAT CCTCTTTGCC
TTCCCGCCGC TGATCGCGGG CGATCTCCTG TTCGAGATGG AGCGCGGGTT CGACTGGCCC
TTCTTCGATC CCGAAAGGGG CGGGGATCCG CTGCTCTGGC AGCACCTGTT CTGGATCTTC
GGCCATCCCG AGGTCTACAT CATCTTCCTG CCCTCGATCG CCCTTGCCGC GATGATCGTA
CCCACGGCGG CGCGCACCCC GATCGTGGGC TACTCCTGGA TCGTGCTCTC GGCGGTGGGG
ACGGGCTTCA TCAGCTTCGG CCTCTGGGTG CACCACATGT TCACCACCGG GCTGCCGGCC
CTGTCGCTCG GCTTCTTCTC GGCGGCCTCC GAGGCGGTCG TCATCCCCAC GGGCATCCAG
CTTTTCGCCT TCGTGGCCAC CCTCATGGTG GGCCGCGTGA AGATGATCCT GCCGATGCTC
TGGATCGCGG GCGGTCTCGC GGTCTTCACC GCAGGCGGGC TCACCGGCGT CATGGTGGCC
ATCGCGCCCT TCGACTGGCA GGTCCACGAC ACCTATTTCA TCGTGGCCCA CCTCCATTAC
ACGCTGTTCG GCGGCATGGT CTTTCCGGTC ATCGCGGGCG TCTATTACTT CTACCCCGTC
ATCGCCAAGA AGACCCTGTC GGAGCGGCTG GGGCGCTGGT CCTTCTGGCT GCTCTTCACC
GGCTTCAACG TGACCTTCCT GCCCATGCAC CTGACCGGGC TGAAGGGGAT GCCCCGGCGC
GTCTTCACCT ATCCCGGCCA TGTCGGCTGG GACTGGCTGA ACCTCGTCTC GACCGTCGGC
GCCTTCGTGA TGGCGGCCGG CTTCGCGGTC TTCGTCTGGG ATCTCCTGCG CCCGAAGCGG
GCGAAGCTCT CCGAGCGCAA CCCGTGGGGA GCCGGCACGC TCGAATGGAC CCACGATCTC
GAGGACGAAT CCTGGGGCGT CCGCTCGATC CCCTACATCG ACACGCGCTA TCCGCTCTGG
CAGCAGCGGG AGCTCGTGGA CCGGATGGAT GCCGGCCGCT TCTACCTGCC CGATGCCGAG
GCGGGGCGGC GCGAGACGCT GGTGACCTCG GTGATCGACG GCCGCCCGCT CCAGCTTCTG
CGGATCGGGG GGCCGACCTG GAAGACGATC TGGGCGGCAG TCTTCACGGG CGGCGCCTTC
ATCTTCCCGA CCTTCGCCTG GTACGGGCCT GCCATCGTCA GCGCGGTTCT GGCCGTGGCC
ATGGTGGTCT GGTGGCTCTG GACCGGATCG GCCGAGATCC CCGAGAAGGA GATGGCCGAC
GTGGGGCTTG GGCTCCGGTT GCCGATCTAT GTCTCGGGCT CCGGGGCGGT CGGCTGGTGG
GCCGTCTGGA TCACGATGCT GGGTGACAGC ACGGCCTTCG CGAGCCTGGT GTTCGGGGTC
TTCTTCTACT GGACGGCGGG CACCGACTAT CCCCCCGCGG GCGCTGCGCA CGCGGACGGA
CCGCTGGCCC TCGCGGCGCT GGCGCTGGGC GCGGCCTCCT GGGCGCTGAC GCTCGCCGCG
CGCGAGGCGA ACCGCCGGCA CCGCACGGGC CTTGCCCGGC TGTGCCTCTC CGCAGCGCCG
CTCCTGACGC TCGCGACCGG GGCCGCGCTG ATCGCCTCGC CCCATGTGGC GGGCCTCGAG
CCCACGGAGC ATGTCTATCC GGCCAGCATG TGGGTCCTCG TGGTCTGGAC CGTCGCCCAC
CTGATCGCGG GCCTGATCTT CCAGCTCTAC GGGCTGGCGG GCCTGATCTT CGGGCGGATC
ACGCCACGCT ACGACGCGCC TTTGTGGAAC TCGGCCCTGT TCTGGCACTT CCTGGGGCTG
ACCGTGCTGG TGACGGTGGC GATGATCGCG GGTGCGCCGC GGGTGCTGGG CTGA
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| Protein sequence | MRKVRDTDAP VPEGPFPPTE AMLAEPVPTE VAEAQADRLR RVWATPKGWR YWSAVNNTEV
GVWYALTALA FMLCAGVLAL LMRVQLAVPH NDFLSADRFN QFFTMHGSAM MFLFAVPMFE
AISIILLPSL LGARDLPFPR LSAYGYWCFL IGGVFVLGSI LFDAAPRSGW FMYPPLATQD
EGLGSDIWLL GLSFIEVASI AAAVELIVGV LKCRPPGMRV NLMPLYAWYV LVVGGMILFA
FPPLIAGDLL FEMERGFDWP FFDPERGGDP LLWQHLFWIF GHPEVYIIFL PSIALAAMIV
PTAARTPIVG YSWIVLSAVG TGFISFGLWV HHMFTTGLPA LSLGFFSAAS EAVVIPTGIQ
LFAFVATLMV GRVKMILPML WIAGGLAVFT AGGLTGVMVA IAPFDWQVHD TYFIVAHLHY
TLFGGMVFPV IAGVYYFYPV IAKKTLSERL GRWSFWLLFT GFNVTFLPMH LTGLKGMPRR
VFTYPGHVGW DWLNLVSTVG AFVMAAGFAV FVWDLLRPKR AKLSERNPWG AGTLEWTHDL
EDESWGVRSI PYIDTRYPLW QQRELVDRMD AGRFYLPDAE AGRRETLVTS VIDGRPLQLL
RIGGPTWKTI WAAVFTGGAF IFPTFAWYGP AIVSAVLAVA MVVWWLWTGS AEIPEKEMAD
VGLGLRLPIY VSGSGAVGWW AVWITMLGDS TAFASLVFGV FFYWTAGTDY PPAGAAHADG
PLALAALALG AASWALTLAA REANRRHRTG LARLCLSAAP LLTLATGAAL IASPHVAGLE
PTEHVYPASM WVLVVWTVAH LIAGLIFQLY GLAGLIFGRI TPRYDAPLWN SALFWHFLGL
TVLVTVAMIA GAPRVLG
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