Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0115 |
Symbol | |
ID | 3719718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 1828582 |
End bp | 1829826 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640071318 |
Product | class I triheme cytochrome c |
Protein accession | YP_353190 |
Protein GI | 77463686 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGACCTG TCCTGCTTCT GGGAGGTCTG GCCGTGGCGG GGGCGCTGGC CGGGTTGGCC GTGGTCTTCC TCGGCCTCTA CAACACCTCG GCGCGGAGCG GGCATTGGCC GGGCGTGAGC TGGGTGCTCC ACACCACCTT CCGCAACTCC GTCGAGCTGC GCGCCCCGTC GCCCGAGGAG GTGCCCGATC TGACGGAGCC CATGGTGCGC CTCGGCGCCC GGCACTATGC CTCGGCCTGC GAGACCTGCC ACGGCGCGCC GGGCACGATG CGGACGGCCA CGATCCGCGC GATGGTGCCC GCGCCTCCGC CCATCGCCGA GGCGGTCGGT TCATGGACGC CGGCCGAACT CGGCTGGATC GTGCGCGAGG GCGTGAAGAT GTCCGGGATG CCGGGCTGGC CCTCGGTGCG CAACGACGAG GTCTGGTCGG TCGTGGCCTT CCTCACCCGC GTGGGCAGCA TGACCCATGA GCAATATGCG GCGCTGGTGG GACCCGCCTC CACCGAGGGC CCGCCGGGCT TCGGCTATTG CGCCGGATGC CACGGCACCG ACGGCGTGTC GGGCAATGCG CGCATTCCCC GGCTCGACAT CCAGACCCCG GACTATCTGG AGATGGCGCT GCTGTCCTAT CGCGACGGGC GGCGGCAGAG CGGCTACATG ACACATGCCG CCTCCGCCGT GCCGGGCGAA AGGCTGCGGG CGCTGGCGCA GCGCTTCGGC CGGGTGCGTG CCGGCGGCGA AGAGGGGGCC ACACGCCCCG CCGCGGGACC GGAAGCCCCG GCGGACACAC CCGCATGGGA CGTCCCGCTC ACCACCCTCT CCGGGTCCTT CCACGGCGGG CCGGAACCTG CCGCCGCCGT GGCGACGCTC AGCGAGCCGG TCGCGGGCTC GGTTGCCGCC GCTGCGGGAG AGGCGCCGCG GGGCGAGGCC GCGGCCGCGG CCGCCGTTGC GGCGGATCCC GTGGTGCGCG GACGCGCTCT GGCGACGGCC GAGGCCGGGC TTCGGGACGT GCCGGCCTGC CAGTCCTGCC ACGGCCCCGA TGCCGAGCGC AGGCGTTCCG ACACGCCGGC GCTTGCCGGG CAATATCGCG CCTATCTCGA AGTGCAGCTG CGGCTCTGGC GCGACGGGGT GCGCGGCGGC GGGCCGCGGG CCCCGCTGAT GACGGAGGCG GCAAAGCTCC TGAGCGATGC GGAGATCGTG GCTCTCGCGG CCTATTACGC CTCGCTTCCG CCGGACGCGC CCTGA
|
Protein sequence | MRPVLLLGGL AVAGALAGLA VVFLGLYNTS ARSGHWPGVS WVLHTTFRNS VELRAPSPEE VPDLTEPMVR LGARHYASAC ETCHGAPGTM RTATIRAMVP APPPIAEAVG SWTPAELGWI VREGVKMSGM PGWPSVRNDE VWSVVAFLTR VGSMTHEQYA ALVGPASTEG PPGFGYCAGC HGTDGVSGNA RIPRLDIQTP DYLEMALLSY RDGRRQSGYM THAASAVPGE RLRALAQRFG RVRAGGEEGA TRPAAGPEAP ADTPAWDVPL TTLSGSFHGG PEPAAAVATL SEPVAGSVAA AAGEAPRGEA AAAAAVAADP VVRGRALATA EAGLRDVPAC QSCHGPDAER RRSDTPALAG QYRAYLEVQL RLWRDGVRGG GPRAPLMTEA AKLLSDAEIV ALAAYYASLP PDAP
|
| |