Gene RSP_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_0097 
SymbolsmoM 
ID3719929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007493 
Strand
Start bp1808034 
End bp1809131 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content65% 
IMG OID640071301 
ProductTRAP-T family sorbitol/mannitol periplasmic binding protein SmoM 
Protein accessionYP_353173 
Protein GI77463669 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.410099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGTC GTTCATTCAT CACCAAGGCC GCCGTGGGAG GGGCCGCCGC GAGCGCCCTC 
GCCGCGCCGG CGCTTGCCCA GTCCGCGCCC AAGGTCACCT GGAGGCTCGC CTCCTCCTTC
CCGAAATCGC TCGACACGAT CTTCGGCGGC GCCGAGGTGC TGTCGAAGAT GCTCTCCGAG
GCCACCGACG GCAACTTCCA GATCCAGGTC TTCTCGGCGG GCGAGCTGGT GCCGGGCCTG
CAGGCCGCCG ACGCCGTGAC CGAGGGCACC GTCGAATGCT GCCACACGGT CGGCTACTAT
TACTGGGGCA AGGATCCCAC CTTCGCGCTC GCGGCGGCCG TGCCCTTCTC GCTGTCGGCG
CGCGGCATCA ACGCCTGGCA CTACCATGGC GGCGGGATCG ACCTCTACAA CGAGTTCCTT
TCGCAGCACA ACATCGTGGC CTTCCCGGGC GGCAACACCG GTGTGCAGAT GGGCGGCTGG
TTCCGGCGCG AGATCAACAC CGTGGCCGAC ATGCAGGGCC TGAAGATGCG GGTCGGCGGG
TTTGCCGGCA AGGTGATGGA GCGTCTGGGC GTCGTGCCGC AGCAGATCGC GGGCGGCGAC
ATCTATCCGG CGCTGGAGAA GGGCACGATC GATGCGACCG AATGGGTCGG CCCCTATGAC
GACGAGAAGC TCGGCTTCTT CAAGGTGGCG CCCTACTACT ACTATCCCGG CTGGTGGGAA
GGCGGCCCGA CCGTCCATTT CATGTTCAAC AAGAGCGCCT ACGAGGGTCT GACCCCGACC
TATCAGTCGC TGCTGCGCAC CGCCTGCCAT GCGGCCGATG CGAACATGCT CCAGCTCTAC
GACTGGAAGA ACCCGACGGC GATCAAGTCG CTCGTGGCGC AGGGAACGCA GCTCCGTCCC
TTCAGCCCCG AGATCCTGCA GGCCTGTTTC GAGGCCGCGA ACGAGGTCTA TGCCGAGATG
GAAGCCTCGA ACCCCGCCTT CAAGAAGATC TGGGACTCGA TCAAGGCCTT CCGCTCCGAG
CATTACACCT GGGCGCAGAT TGCCGAATAC AACTATGACA CCTTCATGAT GGTGCAGCAG
AACGCCGGCA AGCTCTGA
 
Protein sequence
MDRRSFITKA AVGGAAASAL AAPALAQSAP KVTWRLASSF PKSLDTIFGG AEVLSKMLSE 
ATDGNFQIQV FSAGELVPGL QAADAVTEGT VECCHTVGYY YWGKDPTFAL AAAVPFSLSA
RGINAWHYHG GGIDLYNEFL SQHNIVAFPG GNTGVQMGGW FRREINTVAD MQGLKMRVGG
FAGKVMERLG VVPQQIAGGD IYPALEKGTI DATEWVGPYD DEKLGFFKVA PYYYYPGWWE
GGPTVHFMFN KSAYEGLTPT YQSLLRTACH AADANMLQLY DWKNPTAIKS LVAQGTQLRP
FSPEILQACF EAANEVYAEM EASNPAFKKI WDSIKAFRSE HYTWAQIAEY NYDTFMMVQQ
NAGKL