| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0030 |
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| Symbol | |
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| ID | 3720165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 1732315 |
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| End bp | 1734816 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640071226 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_353099 |
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| Protein GI | 77463595 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAGA TGCAAAGCCT GCGCCATCGT CTGATCAGGC AACCCGGTCC GGTGTCCGGC
GAGTGCTGGA TCGCCTTCTT CGATGGCGTG GCCCATCCGG TTCTCATCAA GAACGCGCAA
GGTCAGGTCA TCTTCGCCAA TCGCGCGGCC TGCGACCTGC TCGGTCGGGA TCGCAGCGGT
CTCGCCGGCG GTGCCGAGCA TGAGCTGGTG GCGGGCACGC AGGCCGAGCA GATCGCCTCC
TTCGATGCCG AGGCCATGCG CCGGGGCTCG GTCTCGGCCG AGCAGGAGAT GCCGGGTCCG
CGTGGCGTCC GCCGCTTCCT CGTCTCCCGC CGCCCGGCGG GCGAGCATCT GGTGGTGACC
TTCTTCGAGA TCACCGATCT GCGCGAGACC GAAGGCGTTC TGCGCCAGCG CGAGGCACAT
CTGCGCAATC TGCTCGAGCT GCATCCGGTG GCGCCCTTCA GCTTCACCGC CGACGGGGTG
CTCTCGGATC TCTCCGACCG GCTGGTCGCG ATCACCGGGC TGCCTGCGGG CACGCGGCAT
GTCGATGCCT GGTGGGCCGC GATGCATCCC TGCGACCGGC GCGACCTGCG ACGGGCCTGG
ATCCGCTCCG TCCGGGGGGG GCAGTCCTTC GATGCCGAGC ACCGGCTGCA GATGCCGGAC
GGTGCCTACC GCTGGTTCCG GGCGCGCATC GTGGCCCGGC CGAGGGATCA GGATCAGCGG
GTGGACCGCT GGTTCGGCAT CATCGAGGAT GTGCACGAAA GGCGCACCAC CGTCGAGCAG
CTGCGCGAGA GCGAAGCGCG CTTCCGCGCC TTCGCCGACG ATGCGCCGGT GATGATCTGG
GTGACGGACA CCGAGGGGCG GAACGTCTTC GTCAGCCGCA GCTGGCTCGG TGCCACCGGC
CAGTCGCTGG ACGAGGCTCT GGGGACGGGC TGGATCGATG CCGTTCATCC CGATGACCGC
GATGCCACGG CGGCGATCAC GCGGGAGGCG ATGCGCCGGC GCATCGCCTA CACGAACGAG
TTCCGTATCC GACGGAAGGA TGGCGGGTGG TGCTGGGTCA TCGACGTGGG TCACCCCCGC
CTCCTCGCCG ACGGCACCTT CATCGGCTAT ATCGGCTGCT GCGTCGACAT CAGCGCCCGC
CGTCAGGCCG AGGATGACCG GGTGATGGCG CAGCTCCAGG TCTTTCACAT GGCGCGCCAC
GACATGCTGA CGGGCCTGCC CAACCGGCAT TATTTCGGCG ACTGCTATCA GGAGGCGGTG
GCGAGCCTCG CGCCGGAGCG GTCGGTTGCC GTGCTGATGC TCGATCTCGA CGGGTTCAAG
ACGGTGAACG ACACCCGCGG CCACCCGGTG GGCGATCAGG TGCTGTGCGA AGTCGCCAAC
CGGCTGCGCA CCTCGGTGCG CAGCACCGAC ACGGTGGCGC GGCTGGGCGG GGACGAGTTT
GCCGTGATCC AGACGCCGAT CCGCTCCGAG CAGGAGGCCT GCGATCTGGC CCGCCGCCTG
ATCGCGGCCA TCTCGAAGCC CTTCGATCTC GAGGGTGCGG TGCCCGAAGT GGGCGCCAGC
GTGGGCATCG CCTTTGCCCG CGGGCACGGC GACAGCGCCG AGGAGATCAT GCGCTACGCC
GATGTGGCGC TCTATGCGGC CAAGCAGGCG GGACGCGGCA CCTTCCGTGT CTTCGACGAG
GCGACCGACA CCCATCTTCA GAGCCGGCAG AAGATGAAGG CGGCGCTCCG GGCTGCGCTG
GGTCTGGGCG AACTCTCGGT CTTCTACCAG CCGCTGATCG GGTTGCGCGA CGGGCAGGTC
ACGGCCTGCG AGGCGCTGAT GCGCTGGCAT CGCAAGGGGG CGGGCTGGAT CACGCCCGAC
CAGTTCATCC CGCTTGCGGA AGAGGCGGGG CTCATCGGCG ACATGGGCGA CTGGGTGCTG
CACGAGGCCT GCGCTCAGGC CGCCCGATGG CCGGACAGCG TGTCGGTGGC GGTCAACCTG
TCGCCGCTCC AGTTCCATGG CGGGGCGCTG GTCGATCAGG TGGCCTCGGC GCTGCGCGCC
TCGGGCCTGC CGCCCGAGCG GCTCCAGCTC GAGATCACCG AATCCGTGTT GCTCGACCCC
ACCGACCGGA ACATCGGCGT GCTGCAGGAT CTCCGGGCGC TGGGGGCGAA GATCGTGATG
GACGATTTCG GCACCGGCTA CTCGTCGCTG GGCTATCTGC GCAGCTTCCC CTTCGACAAG
ATCAAGGTGG ATCGCTCCTT CATCCGCGAC CTTCCCGACG CGCGCGAGGC GCTGGCCATC
CTGAAGGCGG TGGCCGGGCT CGGACGCAGC CTCGACATGC GCACCACCGT CGAGGGGGTG
GAGACGCAGG CGCAGCTCGA TTGCGCCATC GCCGAGGGGG TGGACGAGGC GCAGGGCTAT
TTCTTCTCGC GCCCGCTGCC TGCCCCCGGG ATCGCAAGCT TCATCTCCGG CTGCCTGCCC
AAGCGCAGGA TACAGCCGGC GACGGGGGAC GCCGCGACCT GA
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| Protein sequence | MTEMQSLRHR LIRQPGPVSG ECWIAFFDGV AHPVLIKNAQ GQVIFANRAA CDLLGRDRSG
LAGGAEHELV AGTQAEQIAS FDAEAMRRGS VSAEQEMPGP RGVRRFLVSR RPAGEHLVVT
FFEITDLRET EGVLRQREAH LRNLLELHPV APFSFTADGV LSDLSDRLVA ITGLPAGTRH
VDAWWAAMHP CDRRDLRRAW IRSVRGGQSF DAEHRLQMPD GAYRWFRARI VARPRDQDQR
VDRWFGIIED VHERRTTVEQ LRESEARFRA FADDAPVMIW VTDTEGRNVF VSRSWLGATG
QSLDEALGTG WIDAVHPDDR DATAAITREA MRRRIAYTNE FRIRRKDGGW CWVIDVGHPR
LLADGTFIGY IGCCVDISAR RQAEDDRVMA QLQVFHMARH DMLTGLPNRH YFGDCYQEAV
ASLAPERSVA VLMLDLDGFK TVNDTRGHPV GDQVLCEVAN RLRTSVRSTD TVARLGGDEF
AVIQTPIRSE QEACDLARRL IAAISKPFDL EGAVPEVGAS VGIAFARGHG DSAEEIMRYA
DVALYAAKQA GRGTFRVFDE ATDTHLQSRQ KMKAALRAAL GLGELSVFYQ PLIGLRDGQV
TACEALMRWH RKGAGWITPD QFIPLAEEAG LIGDMGDWVL HEACAQAARW PDSVSVAVNL
SPLQFHGGAL VDQVASALRA SGLPPERLQL EITESVLLDP TDRNIGVLQD LRALGAKIVM
DDFGTGYSSL GYLRSFPFDK IKVDRSFIRD LPDAREALAI LKAVAGLGRS LDMRTTVEGV
ETQAQLDCAI AEGVDEAQGY FFSRPLPAPG IASFISGCLP KRRIQPATGD AAT
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