Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0003 |
Symbol | |
ID | 3720257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 1704748 |
End bp | 1706277 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640071200 |
Product | putative site-specific recombinase |
Protein accession | YP_353073 |
Protein GI | 77463569 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.385186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCGG CTATCCAGAT CAAAGGGGAC TCATTTAGAC GGCAGGCAGA AGCTTCCGCG AAGTATGCCG CCGAACATGA TCTTGACCTT ATCGATGACT ACAAGCTTGC CGATCTCGGG GTCTCTGCCT TCAAGTCGGA CAACCTGACT ACCGGGGCTC TCGGACGATT TGTTGCCGAG TGTGAGGCGG GAGAGATTGA GGCAGGATCG TTCCTTCTCA TCGAAAGCCT TGACCGTTTG AGTCGAGACA AGATCCTTGA TGCATTTTCC CTGTTTGCTC GCATTCTCAA GACCGGGGTG AAGATCGTTA CCCTGTCGGA TGGGCAGGTT TACGATGGAT CGTCAGATCA GGTTGGAAGC ATTTACTACG CCATTTCAGT AATGATCCGG TCCAATGACG AGTCTAAGAT CAAATCGACT CGTGGTCTCG CCAACTGGTC GCAGAAGCGG AAGCTTGCTG CCGAACATGG CGTCAAAATG TCGAGTCAAT GCCCTGCATG GCTTAAGCTG TCCGTTGATC GCAAGTCTTA CCTGATCGAT AAGGAACGGG CCAAAATCGT TCAACGCATC TTCGAAGCTT CGGCATCGGG TAAAGGTGCG AACCTCATCA CCAAAGAACT GAATCGCGAC AAGGTTCCGA CATTCGGAAG GGGCGCTTTG TGGGCCGAAG CTTTCGTCTC CAAGACGCTT CGCAATCGTG CAGTCCTCGG GGAATTTCAG CCGGGGCAGT ATGTCAGTGG AAAGCGTCAA CCGGCTGGTG ATCCTATTCC GGGATATTTC CCTCCCGTAA TCGAGGAAGA GCTTTTCGAC ATTGTTCAAG CATCGCTGAG AGGGCGGTTG CTTGCCGGGG GAAGAAGGGG AGAGGGTCAA TCGAACATCT TCACCCATGT TGCTTTCTGC GGCTATTGCG GATCAAAGAT GCGCCATCGG TCGAAAGGAT CACGGGTAAA GGGCAATCCT CCGCATCGTT ACCTGACATG CTTCAACCGC TTTAATGGTC CGGGATGCGA TTGCAAACCT CTCCCTTACG CTGCCTTCGA ACGCTCCTTC CTGACATTTG TTCGGGATGT TGATTTGAGG GGACTTCTGG AAGGTGCAAA GCGCAAGTCC GAAGCAAAGA CGATTGCGGA TCGGATAACG GTCAATGAAG AGAAAGTTAG AAAGGCAGAT GAGAGAATTC GGGATTATCT GATCAAGATC GAAGGTGCTC CCGATCTTGC GGAAATCTTC ATGGAGCGCA TTCGGGAATT GAAAGCCGAG AAGGATGATC TTGTTCGATC TATCGAGGAA TCGAATGATG CTCTTTCGAA GATCAAGTCG GATAACGTGA CCGACGAGGA ACTAGCATCC CTGATTTCGA CGTTCCAAAT CCATGCGGGG AAAATCGTAT TAGGCTTGCG GATCGTATCA AATCGATCAT TGAGCGCATT GACGTCTATC CGAATGGTGA AATCCGCAAA GATGATCCGG CGATTGATCT TGTGCGCGCT TCGGGAGATC CTGATGCCGA AAAGATCATT GCGGCAATGA
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Protein sequence | MSSAIQIKGD SFRRQAEASA KYAAEHDLDL IDDYKLADLG VSAFKSDNLT TGALGRFVAE CEAGEIEAGS FLLIESLDRL SRDKILDAFS LFARILKTGV KIVTLSDGQV YDGSSDQVGS IYYAISVMIR SNDESKIKST RGLANWSQKR KLAAEHGVKM SSQCPAWLKL SVDRKSYLID KERAKIVQRI FEASASGKGA NLITKELNRD KVPTFGRGAL WAEAFVSKTL RNRAVLGEFQ PGQYVSGKRQ PAGDPIPGYF PPVIEEELFD IVQASLRGRL LAGGRRGEGQ SNIFTHVAFC GYCGSKMRHR SKGSRVKGNP PHRYLTCFNR FNGPGCDCKP LPYAAFERSF LTFVRDVDLR GLLEGAKRKS EAKTIADRIT VNEEKVRKAD ERIRDYLIKI EGAPDLAEIF MERIRELKAE KDDLVRSIEE SNDALSKIKS DNVTDEELAS LISTFQIHAG KIVLGLRIVS NRSLSALTSI RMVKSAKMIR RLILCALREI LMPKRSLRQ
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