| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5741 |
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| Symbol | |
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| ID | 3714466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6432022 |
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| End bp | 6433920 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_351465 |
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| Protein GI | 77461958 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.515421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.288543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTTCC CTTCCCGTTT TGAAGTGATC GTCATCGGCG GCGGTCATGC CGGTACCGAG
GCAGCACTGG CCTCAGCACG TATGGGTGCA AAAACCCTTT TGCTGACGCA CAACGTGGAA
ACCCTCGGTG CCATGAGCTG CAACCCGGCC ATCGGCGGCA TTGGCAAAAG CCATCTGGTC
AAGGAAATCG ATGCCCTCGG CGGCGCGATG GCCATGGCCA CCGATCTGGG CGGTATCCAG
TTTCGCGTAT TGAACAGCCG CAAAGGCCCG GCCGTACGTG CAACCCGTGC GCAAGCCGAC
CGTATTCTTT ACAAGGCCGC TGTCCGCGAA ATTCTGGAAA ACCAGCCGAA CCTGTGGATA
TTTCAACAAG CCGCTGACGA CCTGATCGTC GAGCAGGAAC AAGTACGCGG TGTTGTCACC
CAAATGGGTC TGCGTTTCTT CGCGGATTCC GTGGTGTTGA CCACCGGTAC GTTCCTGGGC
GGACTTATCC ACATCGGTTT GCAGAATTTT TCCGGCGGTC GTGCCGGAGA TCCACCGTCG
ATCGCCCTGG CGCATCGTCT GCGCGAACTG CCGCTGCGCG TAGGTCGCCT GAAAACCGGT
ACGCCACCGC GTATCGACGG CAAGTCTGTG GATTTCTCGG TGATGACCGA GCAACCAGGC
GATACGCCGA TCCCGGTGAT GTCGTTCATG GGCAACAAGG AACAGCATCC ACGGCAAGTC
AGTTGCTGGA TCACCCACAC CAACGCGCGC ACCCACGAAA TCATTGCCGC GAACCTCGAC
CGTTCGCCGA TGTATTCCGC TGCAGGCGAA ATCGAAGGCA TCGGCCCGCG TTATTGCCCG
TCGATCGAAG ACAAGATCCA CCGCTTTGCC GACAAGGAAA GCCATCAGGT GTTCATCGAG
CCGGAAGGCC TGACCACCCA TGAGTTGTAT CCGAACGGGA TATCCACAAG CCTGCCGTTC
GACGTGCAAT TGCAGATCGT GCAATCGATC CGCGGCATGG AAAACGCACA CATCGTGCGT
CCGGGTTATG CGATCGAGTA CGACTACTTC GATCCGCGCG ACCTGAAGTA CAGCCTGGAA
ACCAAAGTCA TCGGCGGTCT GTTCTTCGCT GGCCAGATCA ACGGCACCAC CGGTTACGAA
GAAGCCGGTG CTCAGGGGTT GCTGGCTGGC GCGAACGCTG CACTGCGTGC GAAAGGCAAA
GAAGCCTGGT GCCCGCGTCG CGATGAAGCG TACATCGGGG TATTGGTCGA CGACCTGATC
ACCCTCGGTA CCCAAGAGCC GTACCGCATG TTCACTTCCC GCGCCGAGTA CCGCCTGATC
CTGCGTGAGG ACAATGCGGA CCTGCGTCTG ACCGAAAAAG GTCGCGAACT GGGTCTGGTC
GATGATGCGC GCTGGGCGGC GTTCTGCAAG AAACGTGAAA GCATCGAACT CGAAGAGCAG
CGCCTGAAAA GCACCTGGGT TCGCCCGGGC ACTCAGCAGG GCGATGCGAT TGCCGAGAAG
TTCGGCACGC CGCTGACTCA CGAATACAAC TTGCTCAATC TCTTGAGCCG TCCGGAAATC
GACTACGCTG GTCTGGTCGA AGTGACCGGA CTGGGCGCCG AAGATCCACA GGTGGCCGAA
CAGGTCGAGA TCAAGACCAA ATACGCCGGT TACATCGACC GTCAACAGGA CGAAATCGCC
CGTCTGCGCG CCAGCGAAGA CACGAAACTG CCTGTGGATA TCGATTACAC CAACATTTCC
GGTCTCTCCA AGGAGATCCA GAGCAAGCTG GGCGCCACGC GTCCCGAGAC GCTTGGCCAG
GCTTCGCGGA TCCCCGGCGT GACCCCGGCA GCGATTTCGC TGTTGATGAT TCACTTGAAA
AAACGCGGCG CGGGCCGTCA GTTGGAGCAA AGCGCTTGA
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| Protein sequence | MDFPSRFEVI VIGGGHAGTE AALASARMGA KTLLLTHNVE TLGAMSCNPA IGGIGKSHLV
KEIDALGGAM AMATDLGGIQ FRVLNSRKGP AVRATRAQAD RILYKAAVRE ILENQPNLWI
FQQAADDLIV EQEQVRGVVT QMGLRFFADS VVLTTGTFLG GLIHIGLQNF SGGRAGDPPS
IALAHRLREL PLRVGRLKTG TPPRIDGKSV DFSVMTEQPG DTPIPVMSFM GNKEQHPRQV
SCWITHTNAR THEIIAANLD RSPMYSAAGE IEGIGPRYCP SIEDKIHRFA DKESHQVFIE
PEGLTTHELY PNGISTSLPF DVQLQIVQSI RGMENAHIVR PGYAIEYDYF DPRDLKYSLE
TKVIGGLFFA GQINGTTGYE EAGAQGLLAG ANAALRAKGK EAWCPRRDEA YIGVLVDDLI
TLGTQEPYRM FTSRAEYRLI LREDNADLRL TEKGRELGLV DDARWAAFCK KRESIELEEQ
RLKSTWVRPG TQQGDAIAEK FGTPLTHEYN LLNLLSRPEI DYAGLVEVTG LGAEDPQVAE
QVEIKTKYAG YIDRQQDEIA RLRASEDTKL PVDIDYTNIS GLSKEIQSKL GATRPETLGQ
ASRIPGVTPA AISLLMIHLK KRGAGRQLEQ SA
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