Gene Pfl01_5730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5730 
Symbol 
ID3714225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6422891 
End bp6424267 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content58% 
IMG OID 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_351454 
Protein GI77461947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.201404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.43061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCG GACGTATCGT TCAAATCATC GGCGCCGTTA TCGACGTGGA ATTTCCACGC 
GACAGCGTAC CGAGCATCTA CGACGCCTTG AAGGTTCAAG GCGCCGAAAC CACTCTGGAA
GTTCAGCAGC AGCTGGGCGA CGGCGTGGTT CGTACCATTG CGATGGGCTC CACCGAAGGC
TTGAAGCGCG GTCTGGACGT CAACAACACT GGCGCAGCCA TCTCCGTACC GGTCGGTAAA
GCGACTCTGG GCCGGATCAT GGACGTACTG GGCAACCCGA TCGACGAAGC TGGCCCGATC
GGCGAAGAAG AGCGCTGGGG TATCCACCGC GCCGCTCCTT CCTTCGCTGA ACAAGCCGGT
GGCAACGAGC TGCTGGAAAC AGGCATCAAG GTTATCGACC TGGTTTGCCC GTTCGCCAAG
GGCGGTAAAG TCGGTCTGTT CGGTGGTGCC GGTGTAGGCA AGACCGTAAA CATGATGGAA
CTGATCCGTA ACATCGCCAT CGAGCACAGC GGTTATTCCG TGTTCGCCGG TGTGGGTGAG
CGTACTCGTG AGGGTAACGA CTTCTACCAC GAGATGAAGG ACTCCAACGT TCTCGACAAG
GTAGCCCTGG TCTACGGTCA GATGAACGAG CCACCGGGAA ACCGTCTGCG CGTAGCGCTG
ACCGGTCTGA CCATGGCCGA GAAGTTCCGT GACGAAGGTA ACGACGTTCT GCTGTTCGTC
GACAACATCT ATCGTTACAC CCTGGCCGGT ACCGAAGTAT CCGCACTGCT GGGCCGTATG
CCTTCGGCAG TAGGTTACCA GCCGACCCTG GCTGAAGAGA TGGGCGTGCT GCAAGAGCGC
ATCACTTCGA CCAAGCAAGG TTCGATTACT TCGATCCAGG CCGTATACGT ACCAGCGGAC
GACTTGACTG ACCCGTCGCC AGCGACCACG TTTGCTCACC TGGACGCCAC CGTCGTTCTG
TCCCGTGACA TCGCTTCTCT GGGTATCTAC CCGGCGGTAG ACCCACTGGA CTCGACTTCG
CGTCAGCTGG ACCCGAACGT GATCGGCAAC GATCACTACG AGACCGCTCG TGGTGTTCAG
TACGTGCTGC AGCGTTACAA AGAGCTGAAG GACATCATCG CGATCCTGGG TATGGACGAG
CTGTCGGAAG CCGACAAGCA GTTGGTAAAC CGTGCTCGTA AGATCCAGCG CTTCTTGTCG
CAGCCGTTCT TCGTGGCTGA AGTCTTCACC GGTGCTTCGG GTAAATACGT TTCCCTGAAA
GACACCATTG CTGGCTTCAA AGGCATCCTC AACGGTGACT ACGACCACCT GCCAGAACAA
GCGTTCTACA TGGTCGGCGG CATCGAAGAA GCGATCGAGA AAGCCAAGAA ACTGTAA
 
Protein sequence
MSSGRIVQII GAVIDVEFPR DSVPSIYDAL KVQGAETTLE VQQQLGDGVV RTIAMGSTEG 
LKRGLDVNNT GAAISVPVGK ATLGRIMDVL GNPIDEAGPI GEEERWGIHR AAPSFAEQAG
GNELLETGIK VIDLVCPFAK GGKVGLFGGA GVGKTVNMME LIRNIAIEHS GYSVFAGVGE
RTREGNDFYH EMKDSNVLDK VALVYGQMNE PPGNRLRVAL TGLTMAEKFR DEGNDVLLFV
DNIYRYTLAG TEVSALLGRM PSAVGYQPTL AEEMGVLQER ITSTKQGSIT SIQAVYVPAD
DLTDPSPATT FAHLDATVVL SRDIASLGIY PAVDPLDSTS RQLDPNVIGN DHYETARGVQ
YVLQRYKELK DIIAILGMDE LSEADKQLVN RARKIQRFLS QPFFVAEVFT GASGKYVSLK
DTIAGFKGIL NGDYDHLPEQ AFYMVGGIEE AIEKAKKL