Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5729 |
Symbol | atpC |
ID | 3714224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6422420 |
End bp | 6422845 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | F0F1 ATP synthase subunit epsilon |
Protein accession | YP_351453 |
Protein GI | 77461946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.337873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.376694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATGA CAGTCCATTG CGACATCGTC AGCGCGGAAG GAGAAATCTT TTCCGGCCTG GTCGAGATGG TGATTGCGCA CGGTGCTCTG GGTGATCTTG GTATCGCTCT GGGCCACGCG CCGCTGATCA CTAATCTGAA GCCAGGTCCG ATCCGCCTGA TCAAGCAAGG CGGGGAAGCC GAGGTGTTCT ACATCTCCGG TGGTTTCCTC GAGGTTCAGC CGAACATGGT CAAGGTGCTT GCCGATACCG TGCAACGTGC CGCCGACCTG GATGAAGCTC AGGCTCAAGC AGCTCTCAAG GCTGCCGAAG CTGCTCTGCA TGAGAAGAGC GCAGATTTCG ACTACGGAGC TGCGTCCGCA CGTCTGGCCG AGGCTGCAGC TCAGCTGCGC ACCGTCCAGC AGATCCGCAA GAAGTTTGGC GGTTGA
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Protein sequence | MAMTVHCDIV SAEGEIFSGL VEMVIAHGAL GDLGIALGHA PLITNLKPGP IRLIKQGGEA EVFYISGGFL EVQPNMVKVL ADTVQRAADL DEAQAQAALK AAEAALHEKS ADFDYGAASA RLAEAAAQLR TVQQIRKKFG G
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