Gene Pfl01_5727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5727 
Symbol 
ID3714222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6420028 
End bp6420804 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content59% 
IMG OID 
ProductDeoR family transcriptional regulator 
Protein accessionYP_351451 
Protein GI77461944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.354415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAC GCAATACACC TCAGCGCCGT CACAACATTC TGGCTTTGCT CAATGAGCAG 
GGCGAGGTGA GTGTGGATGA ACTGGCCAAG CGCTTCGAAA CTTCCGAAGT TACGATTCGC
AAGGATCTCG CTGCCTTGGA AGGTCATGGC CTGCTGCTGC GTCGCTACGG CGGAGCCATC
ACCATGCCGC AGGAGCTGGT GGCAGACACC AGCCTCAACG TTTCCAAATA CAAGCAGGCG
ATTGCCCGGG CTGCGGTCAA ACGCATCCGT GAACACGCCC GCATCATCAT CGACAGCGGC
AGCACCACCG CCGCCATGAT CCCCGAGCTC GGCCAGCAGC CGGGACTGGT GGTGATGACC
AACTCCCTGC ACGTGGCCAA CGCCCTGAGT GAGCTCGAGC ACGAGCCTGT GCTGCTGATG
ACCGGCGGCA CCTGGGATCC GCACTCGGAA TCCTTTCAGG GCCAGGTCGC CGAGCAGGTA
CTACGCTCTT ACGACTTCGA CCAGTTGTTT ATCGGTGCCG ATGGCATCGA CCTGGTACGT
GGTACCACCA CGTTCAATGA ATTGCTCGGC CTGAGCCGGG TGATGGCGGA AGTGGCGCGG
GAAGTGATCG TGATGGTCGA AGCCGACAAG ATCGGCCGCA AGATTCCCAA CCTGGAGCTG
CCATGGAGCA GTGTCCATAC CCTAATTACC GATGATCGCC TGCCTTTAGA TGCACGCGAT
CAGATTCAGG CTCGCGGTAT CAACTTGATT TGCGCGACTG TCAGTCAGGA GAAATAA
 
Protein sequence
MSKRNTPQRR HNILALLNEQ GEVSVDELAK RFETSEVTIR KDLAALEGHG LLLRRYGGAI 
TMPQELVADT SLNVSKYKQA IARAAVKRIR EHARIIIDSG STTAAMIPEL GQQPGLVVMT
NSLHVANALS ELEHEPVLLM TGGTWDPHSE SFQGQVAEQV LRSYDFDQLF IGADGIDLVR
GTTTFNELLG LSRVMAEVAR EVIVMVEADK IGRKIPNLEL PWSSVHTLIT DDRLPLDARD
QIQARGINLI CATVSQEK