Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5727 |
Symbol | |
ID | 3714222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6420028 |
End bp | 6420804 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | DeoR family transcriptional regulator |
Protein accession | YP_351451 |
Protein GI | 77461944 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.354415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAC GCAATACACC TCAGCGCCGT CACAACATTC TGGCTTTGCT CAATGAGCAG GGCGAGGTGA GTGTGGATGA ACTGGCCAAG CGCTTCGAAA CTTCCGAAGT TACGATTCGC AAGGATCTCG CTGCCTTGGA AGGTCATGGC CTGCTGCTGC GTCGCTACGG CGGAGCCATC ACCATGCCGC AGGAGCTGGT GGCAGACACC AGCCTCAACG TTTCCAAATA CAAGCAGGCG ATTGCCCGGG CTGCGGTCAA ACGCATCCGT GAACACGCCC GCATCATCAT CGACAGCGGC AGCACCACCG CCGCCATGAT CCCCGAGCTC GGCCAGCAGC CGGGACTGGT GGTGATGACC AACTCCCTGC ACGTGGCCAA CGCCCTGAGT GAGCTCGAGC ACGAGCCTGT GCTGCTGATG ACCGGCGGCA CCTGGGATCC GCACTCGGAA TCCTTTCAGG GCCAGGTCGC CGAGCAGGTA CTACGCTCTT ACGACTTCGA CCAGTTGTTT ATCGGTGCCG ATGGCATCGA CCTGGTACGT GGTACCACCA CGTTCAATGA ATTGCTCGGC CTGAGCCGGG TGATGGCGGA AGTGGCGCGG GAAGTGATCG TGATGGTCGA AGCCGACAAG ATCGGCCGCA AGATTCCCAA CCTGGAGCTG CCATGGAGCA GTGTCCATAC CCTAATTACC GATGATCGCC TGCCTTTAGA TGCACGCGAT CAGATTCAGG CTCGCGGTAT CAACTTGATT TGCGCGACTG TCAGTCAGGA GAAATAA
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Protein sequence | MSKRNTPQRR HNILALLNEQ GEVSVDELAK RFETSEVTIR KDLAALEGHG LLLRRYGGAI TMPQELVADT SLNVSKYKQA IARAAVKRIR EHARIIIDSG STTAAMIPEL GQQPGLVVMT NSLHVANALS ELEHEPVLLM TGGTWDPHSE SFQGQVAEQV LRSYDFDQLF IGADGIDLVR GTTTFNELLG LSRVMAEVAR EVIVMVEADK IGRKIPNLEL PWSSVHTLIT DDRLPLDARD QIQARGINLI CATVSQEK
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