Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5716 |
Symbol | |
ID | 3713919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6405917 |
End bp | 6406774 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_351441 |
Protein GI | 77461934 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.205456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTTT ATATCGACAA AGTGACATTC CATGGAAATG CGATGAAGCA AGATGCCCGC ACCTTCGGTA AGCCTGACGG TTTGAACGGT CGTAGCGAGG ACTACCTGGA TTACCAGGAC GTGCCGCGCG TGGTGACGGC GCTGGTGCGT GACCAAGCCG CCGGTGCCTA CAACCCGCCG CATACCCACC GCCATGGACA GTTGCTGTAC GCAGTGAGCG GGGTCATGCG CGCTGTGGCC CAGGGGAGCC TGTGGTTCCT GCCGCCCAAG CGGGCCTTAT GGATCCCCGC CGAGGAAGAA CACGACCAGT TGATGCTCAC GCCGGTACAG ATGCGCTCGA TTTACATCCA GGCCGACGCG GCCGCCTGTT TTGGTGACCG TTGCCGGATT GTGGATGTTT CGCTGCTACT GCGCGAACTG ATCCTGGTGC TGGCTGATGA GCCCATCGAA TATGCCCTCG AAGGACGCAA TACCCATGTG GTGGCGTTGA TCCTCAGTGA ATTGGCGGCA GCCCGTACGT TGCCGTTGCA AATCCCGTGG CCGGTGGATC GTCGGCTGCA GGTGGTGTGC AACGCGATTC TTGACGCGCC TGGACAAAGT CATCGGATCG AATACTGGGC CGACAAGGTC GGGGCCAGCT CGCGGACCTT GATCCGTCTG TTTCTCAAGG AAACCGGCCT AACCTACCGC CAGTGGGTCC AGCAAGTGCG CTTGGCCTGC GCCTTAGAGC GTCTGGAAAA TGGCGAGCCC ATCGGGCGGA TCGCCCAGGA ACTGGGTTAT GTCGGTGCCA GCGCCTTCAG TGCAATGTTT CGCCGGGCTA CCGGTACTTC ACCCCGCGAG TTTCTGGTCC GTGGCTGA
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Protein sequence | MTVYIDKVTF HGNAMKQDAR TFGKPDGLNG RSEDYLDYQD VPRVVTALVR DQAAGAYNPP HTHRHGQLLY AVSGVMRAVA QGSLWFLPPK RALWIPAEEE HDQLMLTPVQ MRSIYIQADA AACFGDRCRI VDVSLLLREL ILVLADEPIE YALEGRNTHV VALILSELAA ARTLPLQIPW PVDRRLQVVC NAILDAPGQS HRIEYWADKV GASSRTLIRL FLKETGLTYR QWVQQVRLAC ALERLENGEP IGRIAQELGY VGASAFSAMF RRATGTSPRE FLVRG
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