Gene Pfl01_5716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5716 
Symbol 
ID3713919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6405917 
End bp6406774 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content60% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_351441 
Protein GI77461934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.205456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTT ATATCGACAA AGTGACATTC CATGGAAATG CGATGAAGCA AGATGCCCGC 
ACCTTCGGTA AGCCTGACGG TTTGAACGGT CGTAGCGAGG ACTACCTGGA TTACCAGGAC
GTGCCGCGCG TGGTGACGGC GCTGGTGCGT GACCAAGCCG CCGGTGCCTA CAACCCGCCG
CATACCCACC GCCATGGACA GTTGCTGTAC GCAGTGAGCG GGGTCATGCG CGCTGTGGCC
CAGGGGAGCC TGTGGTTCCT GCCGCCCAAG CGGGCCTTAT GGATCCCCGC CGAGGAAGAA
CACGACCAGT TGATGCTCAC GCCGGTACAG ATGCGCTCGA TTTACATCCA GGCCGACGCG
GCCGCCTGTT TTGGTGACCG TTGCCGGATT GTGGATGTTT CGCTGCTACT GCGCGAACTG
ATCCTGGTGC TGGCTGATGA GCCCATCGAA TATGCCCTCG AAGGACGCAA TACCCATGTG
GTGGCGTTGA TCCTCAGTGA ATTGGCGGCA GCCCGTACGT TGCCGTTGCA AATCCCGTGG
CCGGTGGATC GTCGGCTGCA GGTGGTGTGC AACGCGATTC TTGACGCGCC TGGACAAAGT
CATCGGATCG AATACTGGGC CGACAAGGTC GGGGCCAGCT CGCGGACCTT GATCCGTCTG
TTTCTCAAGG AAACCGGCCT AACCTACCGC CAGTGGGTCC AGCAAGTGCG CTTGGCCTGC
GCCTTAGAGC GTCTGGAAAA TGGCGAGCCC ATCGGGCGGA TCGCCCAGGA ACTGGGTTAT
GTCGGTGCCA GCGCCTTCAG TGCAATGTTT CGCCGGGCTA CCGGTACTTC ACCCCGCGAG
TTTCTGGTCC GTGGCTGA
 
Protein sequence
MTVYIDKVTF HGNAMKQDAR TFGKPDGLNG RSEDYLDYQD VPRVVTALVR DQAAGAYNPP 
HTHRHGQLLY AVSGVMRAVA QGSLWFLPPK RALWIPAEEE HDQLMLTPVQ MRSIYIQADA
AACFGDRCRI VDVSLLLREL ILVLADEPIE YALEGRNTHV VALILSELAA ARTLPLQIPW
PVDRRLQVVC NAILDAPGQS HRIEYWADKV GASSRTLIRL FLKETGLTYR QWVQQVRLAC
ALERLENGEP IGRIAQELGY VGASAFSAMF RRATGTSPRE FLVRG