Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5710 |
Symbol | |
ID | 3713915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6398433 |
End bp | 6399980 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | PAS/PAC sensor Signal transduction histidine kinase |
Protein accession | YP_351437 |
Protein GI | 77461930 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.107455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATG AATTCGATCG CGTCGTCGAT GCGTTGCCTG GCCTGGCGTT CACCACCCGG GAGGACGGCA GCGTCGACTG CGTCAACCAC GCCTGGTGCG CCTACACAGG GCACAGCGCA CACCAGGTTG CCGATGCCGG CTGGCTGTCG GCTGTGCATC CGGAAGACCT GTCCGGTACG ATCAACGCCT GGAAAAACGC GGTGCATAGT GGTCAGCCCT ATCGCAAAGA ACTGCGCCTG CAACGAGCGG ACGGCACTTA CCGCTGGTTC GTCAGCGACG GCAAACCGAT GCGTGATGAC CAGGGCATGA TTCTGCGCTG GTGGGTGATC AGCGTGGACA TCGACGAGCA GAAGCGCGAC AAGGCACTGA TCGCACGCAC GCTGGCCGAA GTAAGCGCCT CGCAGGATCG TCTGAACACC ATCATCAACG CCATCCCCGG GTTCGTGTGG AGCGCCACGC CCGATGGCAG CGTCAGTTTC GTCAACCAGC GCTGGTGCGA TTTCACCGGC ATGAGCCTGG ACGAGGCGCG CGGAGACGGC TGGGTGCGCG CGGTGCACCC CGACGACGCC GGCCCCCTGG CCCAGCGCTG GGGTGCGTTG CTGCAAACCG GTGAAGCCGG AGAATACGAA ACCCGGTTGC GCCGCTTCGA CGGCGACTAT CGCTGGTTTA TCGTAAGGGC GGTGCCGCAG CGTGATGCTT GGGGCGCGGT TACGTGCTGG TACGGTGAGA ACACCGATAT CGAAGACCGC AAGCGTGCCG AAATGCTCGC CGCCAGCAGG GCCATCGAGC ATCGATTGTC GGAAGAAACC CTGAGCAAGG TGCGCTCGGA ACTGGCGCAC TTGGCGCGAG TGGCTAGCCT TAGCGCGGTG ACCGCCTCGA TTGCACATGA AGTCAATCAG CCCTTGGCCG GCATTATCAC CAATGCCAGC ACTTGCCTGC GCATGCTGGG CGCCGACCCG CCGAATGTCA CAGGCGCCCT GGAAACCGCG CGGCGCACCA TTCGCGATGG TAACCGTGCC GCCGATGTGA TCTACCGGCT GCGCGCGTTG TTTTCGAAAA AAGATATCAC CCTTGAAAGC ATCGATCTGA ACGAAGCCGT GCGGGAAGTC ATCGCCATGC TGCTCAGTGA ACTGCAGCGC AATGGCGTGA CCTTGCACCC GGAACTCGCC GACCACCTGC CGCAAGTCAA GGCCGACCGC GTGCACGTGC AACAAGTCAT CCTCAACCTA ATTCTGAATG CCATCGAGGC GATGAAAACC ATGACTGGCC GCACGCGACA CCTGCACGTC ACCACCGGCC TGGACGAACA CCGGCAAGTC TGCTTTGCCG TAGAGGACAA TGGCTGCGGT TTCGACCCGC TGGACGCCGA GCGCCTGTTC ACGGCGTTCT ACACCACCAA GACCACCGGC ATGGGCATTG GATTGTCCAT TAGCCGCTCG ATCATCGAGC AGCATGACGG GGTTCTGTGG GCCTGTCTCA ATAACGAGGC TGGCGCCACG TTTCAATTCA CCCTGCCCCC GGTGACCGAT ACAAAGGAGG GTATCTGA
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Protein sequence | MSNEFDRVVD ALPGLAFTTR EDGSVDCVNH AWCAYTGHSA HQVADAGWLS AVHPEDLSGT INAWKNAVHS GQPYRKELRL QRADGTYRWF VSDGKPMRDD QGMILRWWVI SVDIDEQKRD KALIARTLAE VSASQDRLNT IINAIPGFVW SATPDGSVSF VNQRWCDFTG MSLDEARGDG WVRAVHPDDA GPLAQRWGAL LQTGEAGEYE TRLRRFDGDY RWFIVRAVPQ RDAWGAVTCW YGENTDIEDR KRAEMLAASR AIEHRLSEET LSKVRSELAH LARVASLSAV TASIAHEVNQ PLAGIITNAS TCLRMLGADP PNVTGALETA RRTIRDGNRA ADVIYRLRAL FSKKDITLES IDLNEAVREV IAMLLSELQR NGVTLHPELA DHLPQVKADR VHVQQVILNL ILNAIEAMKT MTGRTRHLHV TTGLDEHRQV CFAVEDNGCG FDPLDAERLF TAFYTTKTTG MGIGLSISRS IIEQHDGVLW ACLNNEAGAT FQFTLPPVTD TKEGI
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