Gene Pfl01_5700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5700 
Symbol 
ID3713905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6389822 
End bp6391138 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content49% 
IMG OID 
Productepoxide hydrolase-like 
Protein accessionYP_351427 
Protein GI77461920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.530868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.348746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAC GTCATGCCTC GCCGCTAAAC AGCATTGCGG TTGCCGTACT GCTAAGTGCA 
GGAACTTTGA TGTCGGTGTC GCCGTTTGCG CACGCGCAAA ACGGTGCGAC CGCTACAGTA
GGCGCTGTAG TAGGCGACAC AGCAATTCGG CCATTCAAAG TCGAGATTCC GGAAGATGCG
ATAATTGATC TTAAGAAACG CGTCCTGGCC ACTCGCTGGC CAGATCCGGA AACCGTAAAA
GATCAGTCAC AAGGCGTCCA ACAAGATAAG CTAAAGGCTT TGGTTGATTA TTGGGGTAAA
GATTACGACT GGCATAAAGT CCAAAACAAG CTAAACGCAC TTCCCATGTA TATCACGCGG
ATTGACGGAG TGGATATCCA GTTCATCCAT GTCAAATCTA AACATCCTAA CGCTTTACCG
TTGCTATTGA CCCATGGGTG GCCAGGTTCG ATCCTGGAAT TCACCAAATC GATCGCACCT
CTTACAGATC CGACTTCCTA CGGTGGGCGT GCAGAAGATG CCTTTGATGT AATAATTCCT
TCAATGCCAG GATATGGCTT TTCACAACGC CCTACTGAGG GTGGTTGGGG GCCAGAGCGG
ATGGGGGCGG CATGGGATGT GCTGATGAAG CGTTTGGGTT ATAAAAACTA TGTTTCTCAG
GGAGGGGATT GGGGCTCTGT AGTGGCGGAT GCAATGGGAC GCCAAGCTCC TTCGGGGTTG
CGAGCAATCC ATGTAAATAT GCCAGCCACC GTTCCACCTG AGATCGCGCG GGCAATCAAT
GACGGGACAC CTCCTCCTGC AGGAATCACT CCGGAAGAAA AGGCAGCTTA CCAGTCCCTA
AAAGATTTCT TCGGTAAGAA TGCTGCTTAC GGTTCTATGA TGAGCACACG CCCGCAAACA
GTTGGATATG CATTGAGCGA CTCCCCTGCA GGGCTCGCCG CCTGGATCTT TGATAAATTT
AATCAGTGGA CTTACAGCGG CGGCGATGCG GAAAAGTCAT TGAGTAAGGA CGAGATGCTG
GACGATATCT CTCTGTATTG GCTTACTAAT AGTGCTGTTT CATCTGCACG TCTATACTGG
GAAAACAATA ATAATAATTT CAATTCTGTC GAGCAAAAAA CACGCGAAAT TAAGGTTCCA
GTAGCGGTTA CTGTTTTTCC GGGTGAAATC TATCAGGCAC CGAAGACCTG GGCTGAACGA
GCTTACCCAA CGCTAAAATA TTACAATGTT GTTAATAAAG GCGGGCATTT TGCAGCCTGG
GAAGAGCCAG AGCTTTTTGC TTCTGAGCTG CGTAAAGCTT TCAAACCATA TAGATAA
 
Protein sequence
MSIRHASPLN SIAVAVLLSA GTLMSVSPFA HAQNGATATV GAVVGDTAIR PFKVEIPEDA 
IIDLKKRVLA TRWPDPETVK DQSQGVQQDK LKALVDYWGK DYDWHKVQNK LNALPMYITR
IDGVDIQFIH VKSKHPNALP LLLTHGWPGS ILEFTKSIAP LTDPTSYGGR AEDAFDVIIP
SMPGYGFSQR PTEGGWGPER MGAAWDVLMK RLGYKNYVSQ GGDWGSVVAD AMGRQAPSGL
RAIHVNMPAT VPPEIARAIN DGTPPPAGIT PEEKAAYQSL KDFFGKNAAY GSMMSTRPQT
VGYALSDSPA GLAAWIFDKF NQWTYSGGDA EKSLSKDEML DDISLYWLTN SAVSSARLYW
ENNNNNFNSV EQKTREIKVP VAVTVFPGEI YQAPKTWAER AYPTLKYYNV VNKGGHFAAW
EEPELFASEL RKAFKPYR