Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5696 |
Symbol | |
ID | 3713688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6382374 |
End bp | 6383543 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | AAA ATPase, central region |
Protein accession | YP_351423 |
Protein GI | 77461916 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.352624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACGG AAGAATTGAC GAAAGTTAAA TCAGATTTAG CCCAGGTTGC CCGCTTGGCT CTGAGCGAAA AAACTGATGA TGTCCGGCTA TTCGTCGCCC GGCTCGTCAG GCAATACCGC AACACTGAAC CAACGCTTGC TGAGCAGTTG GATAACTATC TGCGCACGAT AGCTCCGAGT GGATCATCCA GTTTTCTGCG CAGAGAAACT CCCTCTTCGC AGGACGCCCC TATTCCCGTG GATGACGAGT CGCGCCTGTC GCTGCTCAAA ATCTATAGCG ATGCACCTGA TTATCCTTCA CCGCTTCTGG CCAGCTCTGT TGTAGAACCG ATCAACCAGC TGATCAAGGA GCGCAGGCAG ATCAAAAAAC TGGCCACGCT TGGCCTGCAT CCTACGAAAT CATCCGTTTT CGTCGGCGCG CCTGGTGTTG GCAAGACCAT TACTGCCCGG TGGATAGCCG CTCAGCTCGG AGTGCCTCTT CTCGTCCTTG ATCTGACAGC AGTGATGAGC AGTCTTCTGG GTAAAAGCGG TGCAAACATC CGATCGGCTC TTGATTACGC CAAGCGTACT CCGTGCGTGC TTTTTCTCGA TGAGATTGAT GCGATCGCCA AACGTCGCAG TGATGAAAGC GATGTGGGCG AGTTGAAAAG GCTGGTGACG GTGATTTTGC AGGAGGTCGA CGAGTGGCCT TCCACGGGGC TTTTGCTCGC AGCAACCAAC CATCCTGAGC TCATAGATCC AGCACTCTGG CGCCGGTTCG ACCTCGTGGT AGAGTTCAAA TCACCTGACG CGCAAACACT TGAAGTCGCG ATTCGACGTT TTCTGGGCCC GGATCTGCCC AAGTTCGAAA AATGGATTGG CATACTTTCG TATGCCTTCC AAAAGCACTC TTTCAGTGAT ATTGAGCGTG AAATACAGCG CTTTCGCCGT ACGTTGGCTT TGGGCGGCAG CAGTGCGCAG AAGCTGATTG AAGATTTAGC GGAACAAAAA GCGGCCAATT TAGGACGTGC TGAGCTACTG GAATTTGTGG GATTGCTAGA CACACAGACC TCTTTATCCC AGCGTGCGAT TCAAGAAATT ACTGGGATCA GTAGAGATAC GATTCGCAAA TATCGGAATG CAGAAAAAGC ACCTGCCTCC GGTAGATCAA GGACGAAAAC TACCGCATGA
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Protein sequence | MTTEELTKVK SDLAQVARLA LSEKTDDVRL FVARLVRQYR NTEPTLAEQL DNYLRTIAPS GSSSFLRRET PSSQDAPIPV DDESRLSLLK IYSDAPDYPS PLLASSVVEP INQLIKERRQ IKKLATLGLH PTKSSVFVGA PGVGKTITAR WIAAQLGVPL LVLDLTAVMS SLLGKSGANI RSALDYAKRT PCVLFLDEID AIAKRRSDES DVGELKRLVT VILQEVDEWP STGLLLAATN HPELIDPALW RRFDLVVEFK SPDAQTLEVA IRRFLGPDLP KFEKWIGILS YAFQKHSFSD IEREIQRFRR TLALGGSSAQ KLIEDLAEQK AANLGRAELL EFVGLLDTQT SLSQRAIQEI TGISRDTIRK YRNAEKAPAS GRSRTKTTA
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