Gene Pfl01_5666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5666 
Symbol 
ID3712962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6346491 
End bp6347678 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content62% 
IMG OID 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_351393 
Protein GI77461886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.228934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.57663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGC AACTTCCACC GGCCTTACAG AATCTGCAGC TTCCGCTTCG CCTGCGACTC 
TGGGACGGCC ATGAATTCAA TCTGGGCCCG ACGCCCAGTG TCACCATCGT GGTCAAGGAC
CCGTTGATGG TGTCCCAGTT GACTCATCCA AGTCTCGACG CGCTGGGGGC GGCGTTCGTC
GAGGGCAAGC TCGAGCTGGA GGGCTCGATC AGCGAAGTCA TCCGGGTGTG CGATGAGCTG
AGCTCCGCGC TACTCGATGA AGACGATGAC AGTCAGCCGG TGCGCACGCT CCACGACAAG
GAAACCGACG CCAAAGCCAT TTCCTACCAT TACGACCTGT CCAACGCGTT CTACCAGCTG
TGGCTGGACA GCGACATGGC GTATTCCTGC GCGTATTTCG AAACCGGCAG CGAATCCCTG
GAGCAAGCCC AGCAAGCCAA GTTCCGGCAC CTGTGCCGCA AGCTGCGCCT GCAGCCCGGC
GACTATCTGC TGGACGTTGG TTGCGGTTGG GGCGGGCTGG CGCGGTACGC CGCCCGAGAG
TTTGGCGCCA AGGTCTTCGG TATCACCCTG AGCAAAGAGC AACTGGCCCT GGCCCGCGAG
CGGGTCAAAG CCGAGGGGCT GGAAGATCAG ATCGAACTGC AACTGCTCGA CTACCGCGAT
CTGCCCCAGG ACGGGCGTTT CGACAAAGTG GTCAGCGTCG GCATGTTCGA ACATGTCGGA
CACGCCAACC TCGCCGAATA CTGCAAAACC CTGTTCGGCG CGGTGAAAGA GGGCGGTCTG
GTGATGAACC ATGGCATCAC CGCCAAGCAC ACCGATGGCC GCCCGGTGGG ACGCGGTGCC
GGGGATTTCA TCGAGAAGTA CGTGTTCCCC AACGGCGAGT TGCCGCATTT GGCGATGATC
TCGGCTGAGA TCAGCGAAGC GGGTCTGGAG ATCGTCGACG TCGAGAGTCT GCGCCTGCAT
TACGCGCGTA CCCTGGACCA CTGGAGCGAA CGGCTGGAGG ACAACCTCGA AGCCGCTGCG
AAACTGGTGC CGGATCAGGC GCTGCGCATC TGGCGTCTGT ACCTGGCGGG CTGCGCTTAT
GCGTTCGCTC GCGGCTGGAT CAATCTGCAC CAGATCCTCG CCGTGAAGGC CCATGCCGAC
GGCAGCCATG AACTGCCATG GACCCGGGAC GACATCTACA ACCCTTGA
 
Protein sequence
MLAQLPPALQ NLQLPLRLRL WDGHEFNLGP TPSVTIVVKD PLMVSQLTHP SLDALGAAFV 
EGKLELEGSI SEVIRVCDEL SSALLDEDDD SQPVRTLHDK ETDAKAISYH YDLSNAFYQL
WLDSDMAYSC AYFETGSESL EQAQQAKFRH LCRKLRLQPG DYLLDVGCGW GGLARYAARE
FGAKVFGITL SKEQLALARE RVKAEGLEDQ IELQLLDYRD LPQDGRFDKV VSVGMFEHVG
HANLAEYCKT LFGAVKEGGL VMNHGITAKH TDGRPVGRGA GDFIEKYVFP NGELPHLAMI
SAEISEAGLE IVDVESLRLH YARTLDHWSE RLEDNLEAAA KLVPDQALRI WRLYLAGCAY
AFARGWINLH QILAVKAHAD GSHELPWTRD DIYNP