Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5662 |
Symbol | |
ID | 3712958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6342436 |
End bp | 6342996 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_351389 |
Protein GI | 77461882 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.342361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTA AAAACCCTTC CGGTGATTTG CCGCAGATTG CCGAGTCTGC CTACGTCGAT AAAACCGCGA TCATCTGCGG CAAAGTCGTC ATCGGTGAAA ACGTGTTCGT CGGCCCGTAC GCGGTGATCC GCGCCGATGA AGTAGACGCC ACGGGCGAGA TGGAGCCGAT CACCATCGGC GCCAATTCGA ACATCCAGGA CGGCGTGGTA ATCCACTCCA AATCCGGCGC GGCGGTGACC ATAGGCGAAT TCAGCTCCAT CGCCCACCGC TCGATCGTGC ATGGCCCGTG TACGGTCGGC GATCGGGTGT TCATCGGCTT CAACAGCGTG TTGTTCAACT GCGTGGTCGG CAATGGTTGC GTGGTGCGAC ACAACTCGGT GGTTGACGGT CGGGATCTGC CGGACGCGTT CTACGTGCCC TCCACCACCC GCATCGGCCC GGGCACCGAC CTCTCACAAT TCCCGCCAGT GAGCGTCAGC GCTTCGGAGT TTTCCGAAGA CGTGGCGCGC ACCAACGTCG ACCTGGTGCG CGGCTACAAA GCCTTGCAGA ACGAGTTCTG A
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Protein sequence | MIRKNPSGDL PQIAESAYVD KTAIICGKVV IGENVFVGPY AVIRADEVDA TGEMEPITIG ANSNIQDGVV IHSKSGAAVT IGEFSSIAHR SIVHGPCTVG DRVFIGFNSV LFNCVVGNGC VVRHNSVVDG RDLPDAFYVP STTRIGPGTD LSQFPPVSVS ASEFSEDVAR TNVDLVRGYK ALQNEF
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