Gene Pfl01_5662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5662 
Symbol 
ID3712958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6342436 
End bp6342996 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_351389 
Protein GI77461882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.342361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTA AAAACCCTTC CGGTGATTTG CCGCAGATTG CCGAGTCTGC CTACGTCGAT 
AAAACCGCGA TCATCTGCGG CAAAGTCGTC ATCGGTGAAA ACGTGTTCGT CGGCCCGTAC
GCGGTGATCC GCGCCGATGA AGTAGACGCC ACGGGCGAGA TGGAGCCGAT CACCATCGGC
GCCAATTCGA ACATCCAGGA CGGCGTGGTA ATCCACTCCA AATCCGGCGC GGCGGTGACC
ATAGGCGAAT TCAGCTCCAT CGCCCACCGC TCGATCGTGC ATGGCCCGTG TACGGTCGGC
GATCGGGTGT TCATCGGCTT CAACAGCGTG TTGTTCAACT GCGTGGTCGG CAATGGTTGC
GTGGTGCGAC ACAACTCGGT GGTTGACGGT CGGGATCTGC CGGACGCGTT CTACGTGCCC
TCCACCACCC GCATCGGCCC GGGCACCGAC CTCTCACAAT TCCCGCCAGT GAGCGTCAGC
GCTTCGGAGT TTTCCGAAGA CGTGGCGCGC ACCAACGTCG ACCTGGTGCG CGGCTACAAA
GCCTTGCAGA ACGAGTTCTG A
 
Protein sequence
MIRKNPSGDL PQIAESAYVD KTAIICGKVV IGENVFVGPY AVIRADEVDA TGEMEPITIG 
ANSNIQDGVV IHSKSGAAVT IGEFSSIAHR SIVHGPCTVG DRVFIGFNSV LFNCVVGNGC
VVRHNSVVDG RDLPDAFYVP STTRIGPGTD LSQFPPVSVS ASEFSEDVAR TNVDLVRGYK
ALQNEF