Gene Pfl01_5657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5657 
Symbol 
ID3717451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6337841 
End bp6339013 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content57% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_351384 
Protein GI77461877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.202196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCA GCGCGGCCTT TGTTTTGCCT TTTTCGGTGT CCGCTACGCA GATACGCAAT 
GCGCGGCTTT GGCGTTCGGA TGACAAGCTT CGGCTGGTGT TCGATCTGAG TGGTTCCGTG
AGCTACAAGA CGTTTACCTT GAGTGCACCA GAGCGGTTGA TCATCGATTT GAACGGCGCC
AGCCTGATTG GGGACTTCAG CCAATTGACG TTATCCGGCA CCCCTATTCA TTCGATCCGC
TCCGGCCATT TTGGCCAAGG GAACACACGG ATCGTGCTGG ATTTAAGCAG TCCGGTTCAG
CTCAATTCAT TCTTGTTGGC GCCTCAGGAT GGGCAAGGAC ATCGCCTGGT TTTGGACTTG
ATGAGCGCAT CAGCAGGAGT CCCGGCGAGC GTTCCACGTG AAACACCCCA GGAAAAATCT
CACCCCAAGC GCGACATCAT GGTGGTGGTC GACCCAGGTC ATGGCGGGAA AGATCCGGGT
GCAATCGGCG CCAAAGGCGA GCGAGAAAAG GATGTGGTGC TGTCCATCGC GCAACTGCTC
GCACGTCGGC TTAAACGTGA GAAAGGCTTT GATGTGAAGC TGGTTCGTAA CGACGATTTC
TTCGTCCCGT TACGCAAGCG TGTGGAAATC GCGCGTCAGC ACAAGGCTGA CATGTTCATC
TCGGTGCACG CCGATGCTGC GCCGCGTCTG ACCGCTTCCG GGGCGTCGGT GTATTGCCTG
TCGGAAGGCG GCGCGACGTC CGCCACCGCG CGGTTCATGG CGCAGCGTGA GAACGGTGTG
GATCTGCTCG GTGCAACCAG TCTGCTCAAT CTCAAAGACA AGGATCCGAT GCTCGCTGGC
GTGATCCTCG ACATGTCGAT GAACGCAACC ATCGCCGCCA GCTTGCAACT CGGAAACACA
GTGCTGAGCA GTCTGGCTGG CATTACCACG CTGCACCAAA AGCGCGTGGA ACAGGCTGGA
TTTGCCGTTC TGAAATCGCC GGATGTGCCG TCAATCCTGG TGGAAACCGG GTTTATTTCC
AACGCACGGG ACAGTCAGCG CTTGGTGACC GCGCGTCATC AGCAGGCCGT GGCGGACGGT
TTGTTTGAGG GCTTGCAGCG TTACTTCCAG AAAAACCCGC CTGTCGACAG CTATATGGCC
TGGCAACAAG AGCAAGAAGG ATATCGGGTT TAG
 
Protein sequence
MLASAAFVLP FSVSATQIRN ARLWRSDDKL RLVFDLSGSV SYKTFTLSAP ERLIIDLNGA 
SLIGDFSQLT LSGTPIHSIR SGHFGQGNTR IVLDLSSPVQ LNSFLLAPQD GQGHRLVLDL
MSASAGVPAS VPRETPQEKS HPKRDIMVVV DPGHGGKDPG AIGAKGEREK DVVLSIAQLL
ARRLKREKGF DVKLVRNDDF FVPLRKRVEI ARQHKADMFI SVHADAAPRL TASGASVYCL
SEGGATSATA RFMAQRENGV DLLGATSLLN LKDKDPMLAG VILDMSMNAT IAASLQLGNT
VLSSLAGITT LHQKRVEQAG FAVLKSPDVP SILVETGFIS NARDSQRLVT ARHQQAVADG
LFEGLQRYFQ KNPPVDSYMA WQQEQEGYRV