Gene Pfl01_5646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5646 
Symbol 
ID3717440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6328611 
End bp6329489 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content64% 
IMG OID 
Productimport inner membrane translocase, subunit Tim44 
Protein accessionYP_351373 
Protein GI77461866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0169336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT TTCTTAGCAT CGCCATGGCG TTGTGCATCG GCCTGACGAT GAGCCTCGAC 
GCCAACGCCA AGCGCTTTGG TGGTGGCAAA AGCGCCGGCG CTGCGCCGAC GCACCAGACC
AGCCAGATGG CTCCTTCTTC CCCAGGCATG GGCGGCGCTG CGGCGACCGC TGGTGCTGCC
GGTGCCGCGG GCGCTGCGGC CAAGGCCGGC GGTGCTTCGA AATGGCTCGG CCCTCTGGCC
GGCATCGCGG CCGGTGGCCT GCTCGCTTCC ATGTTCATGG GCGGCGGCTT CGAAGGCATG
CAGTTCTTCG ATATCCTGAT CATGGCCGTG ATCGCGTTCG TGATCTTCCG CTTCATCGCC
GCCCGTCGCC GCAAGCAACA GGAGCAGTTC GCTCCGGCCG GCGCGCCGAT GCAGCGTGAA
GTGTTCGAAC AGAAACCGGC AGCCATGGGT TCGATCTTCG GTGGTTCGGC CGCGCCTGCT
GCCGCCCGTC CGGTGATCAA CGCGCCGGCC TGGTTCAACG AACAGCGCTT CCTCGAAGCT
GCCCGCAGCC ACTTCCAGGC GCTGCAGCAG CACTGGGACG CCAACGAAAT GGACAAGATC
GCCGAGTTCG TGACTCCGCA GATGTTCGAG TTCCTCAAGC GCGAACGCGC GGAGCTGGGT
GACGCCTTCC AGTCCACCTA CATCGACAAT CTCCAGGTGC AACTGGATGG CGTGGATGAC
CGTGCGGACA AGACCATCGC CACCCTGACC TTCAACGGCG TGTCGAAGAC CTCGCGTTTC
GACCAGCAGG GCGAAGTGTT CAGCGAAAGC TGGAACATGG AACGTCCACA GGGCGACAAC
CAGCCTTGGC TGGTCGCCGG TATCCGCCAG AACGGCTGA
 
Protein sequence
MKRFLSIAMA LCIGLTMSLD ANAKRFGGGK SAGAAPTHQT SQMAPSSPGM GGAAATAGAA 
GAAGAAAKAG GASKWLGPLA GIAAGGLLAS MFMGGGFEGM QFFDILIMAV IAFVIFRFIA
ARRRKQQEQF APAGAPMQRE VFEQKPAAMG SIFGGSAAPA AARPVINAPA WFNEQRFLEA
ARSHFQALQQ HWDANEMDKI AEFVTPQMFE FLKRERAELG DAFQSTYIDN LQVQLDGVDD
RADKTIATLT FNGVSKTSRF DQQGEVFSES WNMERPQGDN QPWLVAGIRQ NG