Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5646 |
Symbol | |
ID | 3717440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6328611 |
End bp | 6329489 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | import inner membrane translocase, subunit Tim44 |
Protein accession | YP_351373 |
Protein GI | 77461866 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0169336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGTT TTCTTAGCAT CGCCATGGCG TTGTGCATCG GCCTGACGAT GAGCCTCGAC GCCAACGCCA AGCGCTTTGG TGGTGGCAAA AGCGCCGGCG CTGCGCCGAC GCACCAGACC AGCCAGATGG CTCCTTCTTC CCCAGGCATG GGCGGCGCTG CGGCGACCGC TGGTGCTGCC GGTGCCGCGG GCGCTGCGGC CAAGGCCGGC GGTGCTTCGA AATGGCTCGG CCCTCTGGCC GGCATCGCGG CCGGTGGCCT GCTCGCTTCC ATGTTCATGG GCGGCGGCTT CGAAGGCATG CAGTTCTTCG ATATCCTGAT CATGGCCGTG ATCGCGTTCG TGATCTTCCG CTTCATCGCC GCCCGTCGCC GCAAGCAACA GGAGCAGTTC GCTCCGGCCG GCGCGCCGAT GCAGCGTGAA GTGTTCGAAC AGAAACCGGC AGCCATGGGT TCGATCTTCG GTGGTTCGGC CGCGCCTGCT GCCGCCCGTC CGGTGATCAA CGCGCCGGCC TGGTTCAACG AACAGCGCTT CCTCGAAGCT GCCCGCAGCC ACTTCCAGGC GCTGCAGCAG CACTGGGACG CCAACGAAAT GGACAAGATC GCCGAGTTCG TGACTCCGCA GATGTTCGAG TTCCTCAAGC GCGAACGCGC GGAGCTGGGT GACGCCTTCC AGTCCACCTA CATCGACAAT CTCCAGGTGC AACTGGATGG CGTGGATGAC CGTGCGGACA AGACCATCGC CACCCTGACC TTCAACGGCG TGTCGAAGAC CTCGCGTTTC GACCAGCAGG GCGAAGTGTT CAGCGAAAGC TGGAACATGG AACGTCCACA GGGCGACAAC CAGCCTTGGC TGGTCGCCGG TATCCGCCAG AACGGCTGA
|
Protein sequence | MKRFLSIAMA LCIGLTMSLD ANAKRFGGGK SAGAAPTHQT SQMAPSSPGM GGAAATAGAA GAAGAAAKAG GASKWLGPLA GIAAGGLLAS MFMGGGFEGM QFFDILIMAV IAFVIFRFIA ARRRKQQEQF APAGAPMQRE VFEQKPAAMG SIFGGSAAPA AARPVINAPA WFNEQRFLEA ARSHFQALQQ HWDANEMDKI AEFVTPQMFE FLKRERAELG DAFQSTYIDN LQVQLDGVDD RADKTIATLT FNGVSKTSRF DQQGEVFSES WNMERPQGDN QPWLVAGIRQ NG
|
| |