| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5643 |
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| Symbol | |
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| ID | 3717437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6322625 |
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| End bp | 6325594 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_351370 |
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| Protein GI | 77461863 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0783661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTGGG GCAGTTTGGC AAGTGGTTCG GCTTGTGTAT GCTCCGTCCA CGTTTCCGGG
CGCATGCTCA CACTTATAAG AACAAGAACG TTGCCTATGA CCCTCAGCTT CGACCTGTCG
GGCCCCTCCT TGGAGCCTCG GGTGATCCGC AAGCTTTACG CCACCCAGAT GGCGGTCGAG
CGCACGCGCC TTCTTTATCA GGGTTCGCTG TTGCCCACCC TGTTCATGTT GATCAATGGT
CTGGTCTGCG CCGGCCTGCT CTGGAGCCCG CAGCGTTACT TTGTGGTCAG CGTCTGGCTG
GTGTGGCTGT TGTCGCTGGT GGCGTTGCGG GTGATTCAGG TCGCTGCGTT CGACTCGGCG
ATTCCCGATC GCCAGGCCCA GCCGATCTGG GGGCGGATGT TCCTGCTCGG CTCGACCATG
ACCGGTCTGA CCCTGGCCGG TGCCGGCATC GCTTTGGTTC CGGCCGACAA CTTCATGCAG
CAGGCCTGGG TGTTCGGCCT GATCGGCGCC GCGACCCTGT CGGCCAGCGT GGCCTACGCC
GTGAGCATTC CGGCCTTTCT TTCCTTTACC TTGCCGTGCC TGTTGCCGGC CATCGGCTAT
CTGTTCTGGG GCGGTGACGA ACTGGCGCGC GGCTGGGGCT GGCTCGGGCT GATCCTGCTC
GGCTCGCTGA GCGTGGTGGC GTGGCAGGTC AATCGGCTGA TCGATCGCGG TTTGCTGCGG
CGCTTCCAGA ACCAGCACCT GATCGAACAC CTGCAACAAG CGCAAACCCG CAGCGAACAG
CTCAATCAGG AGCTGGCGAA GGAAATCGAA CACCGGCGCT GCGCCGAGAG CAAGCTGCGC
GAAGCCCAGG TCGAACTGGA AGACCGGGTC GCCCAGCGCA GCCGGGAACT GGACGTCGCC
AACCAGGCCC TGAGCAAGAG CGAGGCGCGC CTGGCCCTGG CGTTGAAGGC CAGTGAGCTG
GGGCTGTGGG ACTGGAACCT GCAAACCGAC GAAGTTCACC ACACGCAGAT TCAGGAACTG
TTCGGTATTG ATCCGGAATA CGTCACCGGG CTGCTCAGGC ACCTGCGGCC ACGCCTGCAC
CCGGAAGACG TGCCGCCGCT CAAGCGAGCG TTGATCGAGC ACTTGAAGGG GCGCACCGAG
GACTATCAGA TCGAGTACCG CGTGCGCCAC GGCGACGGCC ACTGGGTCTG GATCGAAGAC
CGTGGGCGGG CGGTAGAGCG CGACGAGAAC GGTCGGGTCA TCCGCATGGT CGGCACCCGC
CGCGACATCA GCGTCAGCAA AAGCCTGGAA GCCCAGCAGC AGCTGGCTGC GACGGTGTTC
GAGGCCGCCA GCGAAGGCAT CGTGATCCTC GACCCGAATT ATTCGCTGAT CGCCATCAAT
CAGGCCTTCA GTCGGGTCAC CGGCTATGAC ATCGGCGACA TGCTCGGGCG CAACGTCGTC
GAATTGCCTT GCAGTCGCGA CGCCCGTCGG CACTACGTCG CGATCCGCCA CGCGCTGGAG
CAGCACGGCA GCTGGCAGGG CGAACTGGTG GAAACCCGCA AGAACGGCGA GCTGTATCCG
CAGTGGCTGC AGCTGAATGC CGTGCGCGAC AGTCGGGGCA ATGTGAGCCA TATCGTCGGC
TTCTTCGCCG ATCTGTCGGC GCGCCGCGAA TCCGAAGAGC GCATGCGCTA CCTGACCCAC
TACGACGAGC TCACTGGCCT TGCCAATCGC TCGCTGTTTC GCGAACGCCT GCACGAAGCC
CATCAGCGCG TGCGACAGGG CGGGCGTCGG AGTCTGGCGT TGCTGCACAT CAATCTGGAT
CGCTTCAAGC TGCTCAACGA CAGCCTCGGT CACGAGATCG CCGACCAGTT GCTGCAAAAG
ATGTCCCGGC GTCTGGTCAA TGCTCTTCCG GAAGCCGACA CCATCGCCCG GCTGTCCGGC
GATGAGTTCG CGGTACTGTT CGACGCCTAC GGCAACCTGT CGAGCCTGGC GCGGGTCGCT
ACCCGGTTGT CGAGCAAGCT GCGACTGCCG TTGACGGTCG AAGGGCATGA ACTGGTGGTC
AGTGCCTCGA TGGGCATCAG CATGCTGCCG GACAATGCGC GGGAGATTTC CGCGCTGGTC
AGCCAGTCGA ACATGGCCAT GCAACATGCC AAGCACCTGG GCGGCAACAA CTTCCAGTTC
TACACCGACA GCCTGCAGGC CAGCACGCTG GAACGCCTGC AACTGGAAAA CCAGCTGCGC
AAAGCCATCG AGGACAAGCA GCTCAACGTC TTCTATCAAC CGAAACTGTG TCTGGCGACC
GGCCGTCTCA ACGCGGCGGA AGCGCTGGTG CGTTGGGATC ACCCGACCAT GGGCCGGGTA
CCGCCGGGGG ATTTCATCGG TCTGGCGGAG GAGACAGGGC TGATCGGGCC GATCGGTGAG
TTCGTGCTGC GCCAGGCCTG CTGGCAGGCG TGCGAATGGC AGCGTCAGGG GCTGGCGCCG
ATCCGGGTTT CGGTGAACCT GTCGGTGCAT CAACTGCGTC AGGGCAAACT GGTCAGTCTG
GTGCGCCAGG TGCTGGAGGA AACCGGGCTG GCGCCGCACT ACCTCGAACT GGAGCTGACC
GAAAGCCAGT TGCTCGACAG CGTCGAACAC ATCATCGCCA CGTTCCAGCA GTTGCGGGAT
CTGGGGGTGA AGCTGGCCAT CGACGATTTC GGTACCGGCT ATTCATCGCT GAGCTATCTG
AAACGGATTC CGGTGGACTA CGTGAAGATC GATCAGGCCT TTATCCGTGG ATTGGGCGAG
GGCAGCGAAG ACGCGGCGAT CACCCGGGCG ATCATTGCGA TGGCTCACGG GTTGTCACTG
AAAGTTGTCG CCGAAGGTGT CGAGCGTTCC GAGCAACTGG CGTTTCTGAA AGCTGAAGGT
TGCGACGAGG TGCAGGGCTA TCTGATCAGC CGTCCGGTGG AGGCGGTCGG CCTTGCCGCG
TTGCTGCGTG AACAGGAAAA ACCGCTGTAA
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| Protein sequence | MIWGSLASGS ACVCSVHVSG RMLTLIRTRT LPMTLSFDLS GPSLEPRVIR KLYATQMAVE
RTRLLYQGSL LPTLFMLING LVCAGLLWSP QRYFVVSVWL VWLLSLVALR VIQVAAFDSA
IPDRQAQPIW GRMFLLGSTM TGLTLAGAGI ALVPADNFMQ QAWVFGLIGA ATLSASVAYA
VSIPAFLSFT LPCLLPAIGY LFWGGDELAR GWGWLGLILL GSLSVVAWQV NRLIDRGLLR
RFQNQHLIEH LQQAQTRSEQ LNQELAKEIE HRRCAESKLR EAQVELEDRV AQRSRELDVA
NQALSKSEAR LALALKASEL GLWDWNLQTD EVHHTQIQEL FGIDPEYVTG LLRHLRPRLH
PEDVPPLKRA LIEHLKGRTE DYQIEYRVRH GDGHWVWIED RGRAVERDEN GRVIRMVGTR
RDISVSKSLE AQQQLAATVF EAASEGIVIL DPNYSLIAIN QAFSRVTGYD IGDMLGRNVV
ELPCSRDARR HYVAIRHALE QHGSWQGELV ETRKNGELYP QWLQLNAVRD SRGNVSHIVG
FFADLSARRE SEERMRYLTH YDELTGLANR SLFRERLHEA HQRVRQGGRR SLALLHINLD
RFKLLNDSLG HEIADQLLQK MSRRLVNALP EADTIARLSG DEFAVLFDAY GNLSSLARVA
TRLSSKLRLP LTVEGHELVV SASMGISMLP DNAREISALV SQSNMAMQHA KHLGGNNFQF
YTDSLQASTL ERLQLENQLR KAIEDKQLNV FYQPKLCLAT GRLNAAEALV RWDHPTMGRV
PPGDFIGLAE ETGLIGPIGE FVLRQACWQA CEWQRQGLAP IRVSVNLSVH QLRQGKLVSL
VRQVLEETGL APHYLELELT ESQLLDSVEH IIATFQQLRD LGVKLAIDDF GTGYSSLSYL
KRIPVDYVKI DQAFIRGLGE GSEDAAITRA IIAMAHGLSL KVVAEGVERS EQLAFLKAEG
CDEVQGYLIS RPVEAVGLAA LLREQEKPL
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