| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5638 |
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| Symbol | |
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| ID | 3717471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 6315393 |
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| End bp | 6316859 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_351365 |
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| Protein GI | 77461858 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.190969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.144242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATTC AATGCAAATA CAAGCTCCAA CATCTTGTCC TCGCGGTTGC GCTGGCAGTC
GGTTGCGTAG AGTTTTCTCT TGCGGAGCAG ACTGAGCCAG ACACGTCTGT CGTGAAAGAG
GTGAAACCCA AGAACCCGCG CAAACCTAAG GACAAACCTG CTCCGCTCAA GCTCGCTGAA
GAAACAACGC GTGAGGAAAA GATCGCTCCC CCCCTGGAAA AAATCCCCGT CAGCACTGAG
CTTCCCGTGG TCCCCGCTCA CACAGCCGAC GACATTTCAT CCAAAAAAAT TGCCACGACA
GAGAGCGGCA GCGCACTCAA AGAAAGCCTG GAAAAACCAG CGCCCTTACC GGAACCGGTT
CTGGCCGAAA CGCCTGCGAC TCAACAAGCC TCATTGGCTG ACCAGCCACC GTCAACGGAC
TCCCCTTCAC CAGCAGGCAA CTCAGCCATT GCGGCTCTGC TCGCTGCCGA CGAAACCACC
GCAGCACTCG CCCTCAATCA ATTGTCCGGC GGCAGCAACG CCAACCTCGC CAAGGCCACC
TTGAGCAGCG TCACACCGGT CAGCGCCAGC CTGCTGTCGG CCATGCTTCA GCTCGACGAC
CAGCATGACA ACCAGCCAAG CGCACCCCGC CACGCGGCCG GAAACGCCGA GAGCGGCAGG
ATCTGGCTGC AAGCCCTCGG TCATAGCGGC AAACTGGATC GCGATGTGGA GCCCATGCAG
CATTCCACCA AAGGACTGCT GCTCGGTGCG GACTGGCGCC TCGACGAAGA ATGGCGACTG
GGCTTGATGG GCGGCACCTC CGACACGCGT ATTGATAGCG AGGAACTGGA CGGCGATCTC
GACAGTTGGC ACCTCGGCGC CTACGCCATG CGCCAGACCG GTTCGTTGGC ACTTCGGCTC
GGCGCAGCCT GGAGCAACCA TGAAGGCAGT ACCCGTCGCG AAGTCGCGTT CGGCCGCTTC
CATGACCGAC TCAAAGGCAA CTACCAGGCC AGCACCCAGC AAGTGTTCAT CGAGTCGGGA
TACAACCTGG GGCGGGCCAA CGTCAGCATC GAGCCCTTTG TCGGTATCGG CTATCAACGC
TATCAGCGTG ACGGCTACAC CGAGAAAGGC GGGGCGGCGG CGCTCAGGGT GGATGATCAA
TCCCAAGGCA ACTTCAACAC TACCGTCGGT CTGCGCATGG CGAACGTCAG CACACTGGAT
AACGGTATGC GCCTCACGCC ACGATTCAGC GCGGGATGGA AACACGTTTA CGGCGAGACC
TACACCAGCA CCCGACAACG TCTGGTCGCC GGCGGCCATG GCTACACCGT TTACGGCGCA
GAGCTGGATC GCAATAGCCT GACGCTGGAC ACCGGGCTTG ATCTGGCCGT CTCGTCCAGC
CACACATTCG GCGTTGGCTT GTCGGGCGAG ATCGGTACCG ACAGCCGAAA CCACGGCGTA
TCGGGCCAGT GGCGAATGGC GTTCTGA
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| Protein sequence | MPIQCKYKLQ HLVLAVALAV GCVEFSLAEQ TEPDTSVVKE VKPKNPRKPK DKPAPLKLAE
ETTREEKIAP PLEKIPVSTE LPVVPAHTAD DISSKKIATT ESGSALKESL EKPAPLPEPV
LAETPATQQA SLADQPPSTD SPSPAGNSAI AALLAADETT AALALNQLSG GSNANLAKAT
LSSVTPVSAS LLSAMLQLDD QHDNQPSAPR HAAGNAESGR IWLQALGHSG KLDRDVEPMQ
HSTKGLLLGA DWRLDEEWRL GLMGGTSDTR IDSEELDGDL DSWHLGAYAM RQTGSLALRL
GAAWSNHEGS TRREVAFGRF HDRLKGNYQA STQQVFIESG YNLGRANVSI EPFVGIGYQR
YQRDGYTEKG GAAALRVDDQ SQGNFNTTVG LRMANVSTLD NGMRLTPRFS AGWKHVYGET
YTSTRQRLVA GGHGYTVYGA ELDRNSLTLD TGLDLAVSSS HTFGVGLSGE IGTDSRNHGV
SGQWRMAF
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