Gene Pfl01_5634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5634 
Symbol 
ID3717467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6310219 
End bp6310872 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content62% 
IMG OID 
Productnegative transcriptional regulator 
Protein accessionYP_351361 
Protein GI77461854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000166021 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.209584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAT TCGCCAAGGA AATTTTCTCC ATGTACACGC CCCGCGCCTT TGCCATCGAC 
GACCTGTCCC AACTGCACGA ACTGATCCTC GCCACCCGCC TCGCCATATT GGTCACCCAT
GGCGAACAAG GCTTGCAGGC CAGTCATGTG CCAGTGCTGC TGCATCGTGA ACAAGGTCCG
AACGGCACGC TGTACGGGCA TCTGGCCAAG GCCAATCCGC AGTGGAAAGA CCTGCGCGAC
GGCGCCGAGG CGATGGTGAT TTTTCCCGGT GCCGATGCCT ACGTCAGCCC GGGCTTTTAC
CCGAGCAAGG CCGAGCACGG CAAAGTCGTG CCGACCTGGA ACTACGTCGC TGTGCACGCC
TACGGTCACG CCGAAACCTT CAGCGATGGC GGTCGGTTGC TGGACATCGT CAGCACCCTC
ACCGACCGCC ATGAAGCGGG TCGCGACCAG CCCTGGTCGG TCGACGATGC TCCGGCGGAT
TACATCGACG GCATGCTCAA GGCCATCGTC GGGTTCGCCA TTCCGATCGA CCGCCTCGAA
GGCAAGCGCA AGCTCAGCCA GAACCGCAGC GCCGAAGATA TCGCCGGCGT ACGCGAAGGC
CTGGCCGCCA GCCCCGACAT CAACGATCAA ACCCTCGCTC ACTTGATGCG TTAA
 
Protein sequence
MLAFAKEIFS MYTPRAFAID DLSQLHELIL ATRLAILVTH GEQGLQASHV PVLLHREQGP 
NGTLYGHLAK ANPQWKDLRD GAEAMVIFPG ADAYVSPGFY PSKAEHGKVV PTWNYVAVHA
YGHAETFSDG GRLLDIVSTL TDRHEAGRDQ PWSVDDAPAD YIDGMLKAIV GFAIPIDRLE
GKRKLSQNRS AEDIAGVREG LAASPDINDQ TLAHLMR