Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5634 |
Symbol | |
ID | 3717467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6310219 |
End bp | 6310872 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | negative transcriptional regulator |
Protein accession | YP_351361 |
Protein GI | 77461854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000166021 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.209584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCAT TCGCCAAGGA AATTTTCTCC ATGTACACGC CCCGCGCCTT TGCCATCGAC GACCTGTCCC AACTGCACGA ACTGATCCTC GCCACCCGCC TCGCCATATT GGTCACCCAT GGCGAACAAG GCTTGCAGGC CAGTCATGTG CCAGTGCTGC TGCATCGTGA ACAAGGTCCG AACGGCACGC TGTACGGGCA TCTGGCCAAG GCCAATCCGC AGTGGAAAGA CCTGCGCGAC GGCGCCGAGG CGATGGTGAT TTTTCCCGGT GCCGATGCCT ACGTCAGCCC GGGCTTTTAC CCGAGCAAGG CCGAGCACGG CAAAGTCGTG CCGACCTGGA ACTACGTCGC TGTGCACGCC TACGGTCACG CCGAAACCTT CAGCGATGGC GGTCGGTTGC TGGACATCGT CAGCACCCTC ACCGACCGCC ATGAAGCGGG TCGCGACCAG CCCTGGTCGG TCGACGATGC TCCGGCGGAT TACATCGACG GCATGCTCAA GGCCATCGTC GGGTTCGCCA TTCCGATCGA CCGCCTCGAA GGCAAGCGCA AGCTCAGCCA GAACCGCAGC GCCGAAGATA TCGCCGGCGT ACGCGAAGGC CTGGCCGCCA GCCCCGACAT CAACGATCAA ACCCTCGCTC ACTTGATGCG TTAA
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Protein sequence | MLAFAKEIFS MYTPRAFAID DLSQLHELIL ATRLAILVTH GEQGLQASHV PVLLHREQGP NGTLYGHLAK ANPQWKDLRD GAEAMVIFPG ADAYVSPGFY PSKAEHGKVV PTWNYVAVHA YGHAETFSDG GRLLDIVSTL TDRHEAGRDQ PWSVDDAPAD YIDGMLKAIV GFAIPIDRLE GKRKLSQNRS AEDIAGVREG LAASPDINDQ TLAHLMR
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