| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5633 |
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| Symbol | |
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| ID | 3717466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6308603 |
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| End bp | 6310156 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_351360 |
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| Protein GI | 77461853 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000615538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.236104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATT CGACCACGCT GTCGCTGCCG TTCAACCCTG CCGGTATCGA ACTCGACCGC
CGCAAAGGCC TGAGCCGTCA GCTCTATCAG GCCTTGCGCC TGCGGGTGCT CGACGGGCGC
CTGGCCAGCG GCACGCGCCT GCCGGCCAGC CGCGATCTGG CGGCAGCGTT GGGGATTTCC
CGCAACAGTG TGGTGCGTGC CTACGATCAA CTGTATGCCG AAGGTTTCAT TGAAGGCCGG
GTCGGGGATG GCACTTATGT GGCGCAGTTA CCGCAATCGG TGGCGCCCGC GAAAAAATTA
TCCACAAAAG TATCCACAGG GTTTTCAACA GGCTTACCCA CAGCCTTATC CACAATTTCG
GCCAATTCAA CTGGGGATTT ATCCAGCAAG GTTATCCACA GCGGTGCATT GCAGCGGCTT
GAGCAGAACC ATTTGCCGAC GCCACCAAGC GGTCCGCCGC GAGCATTCCG GGTCGGTGTT
CCGGCGTTCG ATCTGTTCCC GTTCGACGTC TGGGCCAAGC TGAGCGCGGC GTTCTGGCGC
AAACCCGATT TGCAGCAACT GTGTTACGGC GACCCGGCGG GCGATGCGCG CCTGCGCGGG
CTGATCGCCG CTTATTTGCG CAGTTCGCGC GGCATGCAGT GCTCGGCTGA GCAAATTGTG
ATCACCAGTG GCGCGCAACA GGGAATCAGC CTTTGTGCAC AGTTGCTGGT GGAGCCGGGC
GCCGGCGTGG GCATCGAGAA TCCCGGCTAT CGCGCAGCGG GTCATGCGTT CGCCTTGGCC
GGCGGTCGAT TGCACGGCAT TGCGGTGGAT GAGGAGGGCA TCGACTGCGC GGCACTGGCG
GCCGCCGAAG ATTGCCGGGT GGCGTATGTC ACACCGTCTC ATCAATACCC GACCGGGGTG
GTGATGAGCC TGGCGCGACG TCTGGAACTG CTGGCCTGGG CCGAGCGCAC CGGCGGCTGG
ATCGTCGAGG ACGACTACGA CGGCGAGTAT CGCTACACCG GCGCACCCTT GGCCCCGCTG
GCGGCGCTCG ACCGCCAGGG CCGCGTGTTG TATGTCGGCA CCTTCGGCAA AGTCGCGTTC
CCCGCGCTGC GCCTGGGGTA TCTGGTGTTG CCGCCGACAC TGGTGGAGGC GTTTGCGCAG
CGGCGGGCGG TGGATGTCCG GCATTCCGAA GTGAGCACTC AAGCGGTGAT GGCCGAATTC
ATGGCGGCCG GGCACTTTCA GCGGCACATC CGGCGGATGC GTCGGGCAGC CCTGAGTCGG
CGTAACGCAC TCATCAATGG TTGGCCGCAA GGATTGGCGG GTGTGGGGGA ATTGCCGGCG
GTGTCAGCGG GGCTGCATCT CACCGTGGCG GTCGACAGTG TGGCCCGCGA ACAACAGTTG
ATCGAGCAGG CCGCCAGCGT GGAGGTGGAG ATCCATGGCT TGAGCAAATA TTGGCTGCCG
GACTCGACGA CGCCGCTCGA TCAGCGCGCC GGTCTGGTGC TGGGTTTTGC GGCGGTGCCG
GAGCCGGCGA TCGAGTCGGC CCTGGCCCGT TTGCGGCAAG CCTGGGGTGA GTGA
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| Protein sequence | MPDSTTLSLP FNPAGIELDR RKGLSRQLYQ ALRLRVLDGR LASGTRLPAS RDLAAALGIS
RNSVVRAYDQ LYAEGFIEGR VGDGTYVAQL PQSVAPAKKL STKVSTGFST GLPTALSTIS
ANSTGDLSSK VIHSGALQRL EQNHLPTPPS GPPRAFRVGV PAFDLFPFDV WAKLSAAFWR
KPDLQQLCYG DPAGDARLRG LIAAYLRSSR GMQCSAEQIV ITSGAQQGIS LCAQLLVEPG
AGVGIENPGY RAAGHAFALA GGRLHGIAVD EEGIDCAALA AAEDCRVAYV TPSHQYPTGV
VMSLARRLEL LAWAERTGGW IVEDDYDGEY RYTGAPLAPL AALDRQGRVL YVGTFGKVAF
PALRLGYLVL PPTLVEAFAQ RRAVDVRHSE VSTQAVMAEF MAAGHFQRHI RRMRRAALSR
RNALINGWPQ GLAGVGELPA VSAGLHLTVA VDSVAREQQL IEQAASVEVE IHGLSKYWLP
DSTTPLDQRA GLVLGFAAVP EPAIESALAR LRQAWGE
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