| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5632 |
|---|
| Symbol | |
|---|
| ID | 3717465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6307443 |
|---|
| End bp | 6308543 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_351359 |
|---|
| Protein GI | 77461852 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0464998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.120385 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAC TCAAGCAATT CATCGCGCCG GCGTTGTGCG CGGCGCTGCT GAGCGGCGCC
GCACACGCCG AAGAACGCAC CCTGCGCGTC TACAACTGGT TCGACTACAT CACCCCCAAG
GCGCTGGAAG ATTTCAAGGC GCAGAACAGC CAGACCAAAC TGGTCTACGA CATCTTCGAC
ACCAACGAAG CACTGGAAGC CAAGCTGCTG ACCGGCAACT CCGGCTACGA CGTGGTGGTG
CCGTCCAACG TGTTCCTCGC CAAGCAGATC GAGGCCGGGG TATTCCAGCC GCTGGATCGC
AGCCAGTTGC CGAACTGGAA CCACCTCGAC CCGAAACTGA TGAAGCTGAT CGAAGCCAAC
GATCCGGGCA ACCAGTTCGC CGTGCCGTAC ATGTACGGCA CCATCCTGAT CGGCTTCAAC
CCGGCCAAGG TCAAGGCCGC GCTGGGCGAC AACGCGCCGG TGGACAGCTG GGACCTGATC
TTCAAGGAAG AGAACATCAG CAAGCTCAAG CAGTGCGGTG TGGCCCTGCT CGATTCGCCG
TCGGAGATCC TGCCGCTGGC CCTGCAACAC CTCGGCCTGG ATCCCAACAG CAAGAACCCG
GCGGACTACG CCAAGGCTGA AGCGCTGTTG ATGAAGATTC GCCCGTACGT GACCTACTTC
CATTCGTCCA AGTACATGGC CGACATCGCC AACGGCGACA TCTGCGTCGC GGTCGGTTAT
TCGGGCAGCT TCTCGCAAGC GGCCAACCGC GCCAAGGAAG CGAAGAACGG CGTGGTGGTG
GACATGCGCC TGCCGAAAGA AGGCGCCCCG ATCTGGTTCG ACATGCTCGC GATCCCGAAA
GGCGCGAAGA ACCCGCAGGA CGCCTACACC TTCATCAACT ACCTGCTGCA ACCGCAGGTG
ATCGCGCCGG TCAGCGATTT TGTCGGTTAT CCGAACCCGA ACAAGGACGC CACCGAACTG
GTCGACCCGG CGATTCGCAA CAATCCGAAT CTGTACCCGA CCGATGCGGC GATGAATACG
CTGTACACCC TTCAGCCATT ACCGCGCGAT GCGGAACGGG CACGCACGCG GGCGTGGACG
AAGATCAAAT CCGGCACCTG A
|
|---|
| Protein sequence | MSRLKQFIAP ALCAALLSGA AHAEERTLRV YNWFDYITPK ALEDFKAQNS QTKLVYDIFD
TNEALEAKLL TGNSGYDVVV PSNVFLAKQI EAGVFQPLDR SQLPNWNHLD PKLMKLIEAN
DPGNQFAVPY MYGTILIGFN PAKVKAALGD NAPVDSWDLI FKEENISKLK QCGVALLDSP
SEILPLALQH LGLDPNSKNP ADYAKAEALL MKIRPYVTYF HSSKYMADIA NGDICVAVGY
SGSFSQAANR AKEAKNGVVV DMRLPKEGAP IWFDMLAIPK GAKNPQDAYT FINYLLQPQV
IAPVSDFVGY PNPNKDATEL VDPAIRNNPN LYPTDAAMNT LYTLQPLPRD AERARTRAWT
KIKSGT
|
|---|
| |