| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5627 |
|---|
| Symbol | |
|---|
| ID | 3717461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6302085 |
|---|
| End bp | 6303092 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | asparaginase |
|---|
| Protein accession | YP_351355 |
|---|
| Protein GI | 77461848 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0567778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.243467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCT CGACCTACCC TGCCGCCCAG CACGTCATGG TGCTGTACAC CGGTGGCACC
ATCGGCATGC AGGCCAGCGC CAATGGCCTG GCCCCGGCCT CCGGTTTCGA AGCGCGGATG
CGCGATTACC TGCACAGCCA GCCGGAGCTG GTGGTGCCGC AGTGGCGCTT TCGCGAGATG
TCGCCGCTGA TCGACAGCGC CAACATGACC CCGGCTTACT GGCAGCAACT GCGTGAAGCG
GTGGTCGACG CCGTCGATGT GCAAGGTTGC GACAGCGTGC TGATCCTGCA CGGCACCGAC
ACCCTGGCCT ACAGCGCCGC CGCCATGAGC TTCCAGTTGC TCGGCCTGCA CGCCCGCGTG
TGCTTCACCG GCTCGATGCT GCCGGCCGGC GTCACCGACA GCGACGCCTG GGAAAACCTC
AGCGGCGCAC TGGTCGCCCT CGGCCACGGC CTGGCGCCGG GCGTGCACCT GTACTTCCAC
GGCGAGCTGC TGGCGCCGAC CCGTTGCGCA AAAGTGCGCA GCTTCGGCCG TCACCCGTTC
AAACGCCTGG AGCGCCAGGG TGGCGGCGTG AAAGCCACTT CCCTGCCAGC AGCGTTGAAC
TACAACCAAC CGAAGCAACT GGCAAAAGTT GCCGTGTTGC CGCTGTTCCC GGGCATTGGC
GCCGAGATCA TCGACGGCCT GCTCGACAGC GGCATTCAGG GTCTGGTGCT GGAGTGCTAC
GGCAGCGGCA CCGGGCCGAG CGACAACCCG CAATTCCTCG CCAGCCTCGG CCGGGCGCGG
GACAGCGGCG TGGTCGTGGT GGCGGTCACG CAGTGCCATG AAGGCGGTGT GGAACTGGAT
GTGTATGAAG CCGGCAGCCG CTTGCGCGGT GTTGGCGTGT TGTCCGGTGG CGGCATGACT
CGCGAGGCAG CGTTCGGCAA GTTACACGGG TTGCTGGGGG CAGGACTCGA AGTAACAAAC
ATTCGGCAGC TTGTGGAACT GGATCTCTGT GGAGAACTGT CTTTGTAA
|
|---|
| Protein sequence | MNSSTYPAAQ HVMVLYTGGT IGMQASANGL APASGFEARM RDYLHSQPEL VVPQWRFREM
SPLIDSANMT PAYWQQLREA VVDAVDVQGC DSVLILHGTD TLAYSAAAMS FQLLGLHARV
CFTGSMLPAG VTDSDAWENL SGALVALGHG LAPGVHLYFH GELLAPTRCA KVRSFGRHPF
KRLERQGGGV KATSLPAALN YNQPKQLAKV AVLPLFPGIG AEIIDGLLDS GIQGLVLECY
GSGTGPSDNP QFLASLGRAR DSGVVVVAVT QCHEGGVELD VYEAGSRLRG VGVLSGGGMT
REAAFGKLHG LLGAGLEVTN IRQLVELDLC GELSL
|
|---|
| |