Gene Pfl01_5621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5621 
Symbol 
ID3717455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6294834 
End bp6295916 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID 
Productphosphoribosylaminoimidazole carboxylase ATPase subunit 
Protein accessionYP_351349 
Protein GI77461842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.674146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.399285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG GTGTAATCGG TGGCGGCCAG TTGGGTCGCA TGTTGGCCCT GGCGGGCACC 
CCGCTGGGCA TGAACTTCGC TTTCCTCGAC CCTGCGCCGG ACGCTTGCGC CGCTGCGCTG
GGCGAACACC TGCGGGCCGA TTACGGCGAT CAGGATCACC TGCGTCAATT GGCCGATGAA
GTCGATCTGG TGACCTTCGA GTTCGAAAGC GTCCCGGCGG AAACCGTGGC GTTCCTTTCG
CAGTTCGTGC CGGTCTACCC GAGCGCTGAA GCCCTGCGCA TCGCCCGCGA CCGCTGGTTC
GAAAAGAGCA TGTTCAAGGA CCTGGGGATT CCGACCCCAG CGTTCGCCGA CATCCAGTCG
CAAGCCGACC TGGACGCCGC CGTTGCGTCG ATCGGCCTGC CGGCCGTCCT GAAAACCCGC
ACCCTGGGTT ACGACGGCAA GGGCCAGAAA GTCCTGCGCA AGCCGGAAGA TGTGGTCGGT
ACCTTCGCCG AACTGGGCAG CGTGCCTTGC CTGCTGGAAG GCTTCGTGCC ATTCACTGGC
GAAGTGTCGC TGATCGCCGT GCGCGCCCGC GATGGCGAGA CGAAGTTCTA TCCACTGGTG
CACAACACCC ACGACAGCGG CATCCTCAAG CTGTCGGTCG CCAGCTCCGA TCACCCGCTC
CAGGCCCTGG CCGAAGATTA TTCCAGCCGC GTGCTCAAAC AGCTGGATTA TGTCGGTGTG
ATGGCGTTCG AGTTCTTTGA AGTCGACGGC GGCCTCAAGG CCAACGAAAT CGCACCGCGC
GTGCACAACT CCGGGCACTG GACCACCGAA GGCGCCGAGT GCAGCCAGTT CGAAAACCAC
CTGCGGGCCG TTGCCGGTCT GCCGCTGGGT TCGACCGCCA AGGTCGGCGA GAGCGCGATG
CTCAACTTCA TCGGCGTTGT TCCGCCGGTT GAAAAAGTCA TCGCCATCGA CGATTGCCAC
CTGCATCACT ACGGCAAGGC CTTCAAGGCC GGGCGCAAGG TCGGTCACGC CAACCTGCGC
TGCAAGGACA AGGCGACCCT CGAGCAACAG ATTCTCAAGG TCGAAGCGCT GATCGCCGAG
TAA
 
Protein sequence
MKIGVIGGGQ LGRMLALAGT PLGMNFAFLD PAPDACAAAL GEHLRADYGD QDHLRQLADE 
VDLVTFEFES VPAETVAFLS QFVPVYPSAE ALRIARDRWF EKSMFKDLGI PTPAFADIQS
QADLDAAVAS IGLPAVLKTR TLGYDGKGQK VLRKPEDVVG TFAELGSVPC LLEGFVPFTG
EVSLIAVRAR DGETKFYPLV HNTHDSGILK LSVASSDHPL QALAEDYSSR VLKQLDYVGV
MAFEFFEVDG GLKANEIAPR VHNSGHWTTE GAECSQFENH LRAVAGLPLG STAKVGESAM
LNFIGVVPPV EKVIAIDDCH LHHYGKAFKA GRKVGHANLR CKDKATLEQQ ILKVEALIAE