Gene Pfl01_5618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5618 
Symbol 
ID3717694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6292886 
End bp6293785 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID 
Productaldose 1-epimerase 
Protein accessionYP_351346 
Protein GI77461839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.635516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.665092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC CCAACGTTGA AGCCGTGAAA CTGGATGAAC TGAACTGCTG GCGCATCCGC 
CACGGTCAGG CCGAAGTGCT GGTGGCCCAG CAAGGCGCGC ACATCCTCAG TTATCAGGTG
GACGGCCAGC CGCCCCTGAT CTGGCTGAAC GACAAGGCCG TGTTCAAGAC CGGCAAGAGC
ATCCGCGCCG GTGTGCCGGT GTGCTGGCCG TGGTTCGGCA AGTTCGAACG CAACCCGCAG
AACGTGCAGG CGATGCGCAC GAGCGAAGAA CCGGCCGGTG CCCACGGATT TGTCCGGGCG
ATGGATTGGG AACTGGGCGG CATCGAAACC GAAGGCGAAA GCCTGAAAGT GGAATTCAAG
CTGCCCTACC CCGAGGGCGG TTTTCCGGAA TGGCCGCATC AGGTCGACCT GACCCTGACC
CTGCGCCTCG ACGATCAGTT GCACATCAGT CTGACCAGCC ACAACCGTGG CACCGACACC
GTCAGCATCA GTCAGGCGCT GCACAGCTAT TTCGCGGTCA GCGATGTGCG CAACGTGCGC
GTCGAAGGCG TGGATGGCCT GGATTACATC GAGACCCTGG ACGACTGGAA AACCTTCACC
CAGCAGGGTG ATCTGCGTTT TGCCGGGGAA ACCGACCGCA TCTACCTCGA CGCCCCTGCG
CAACTGAGCA TCGTCGACCC GGCCTGGGAA CGGCGCATCG TGCTGACCAC CACCGGCTCC
CGCACGGCGG TGATCTGGAA CCCGTGGATC GACCGCGCCG CTGCGCTCAG CGACATGGAC
AACGATGGCT GGCAGCGCAT GCTCTGCATC GAGACGGCGA ACGTGATGAG TGATGTGATG
AACCTGGCGC CGGATGCCAG TCACACCATG GGTGTCAGCG TCGGCAGCCA GCCACTCTGA
 
Protein sequence
MNTPNVEAVK LDELNCWRIR HGQAEVLVAQ QGAHILSYQV DGQPPLIWLN DKAVFKTGKS 
IRAGVPVCWP WFGKFERNPQ NVQAMRTSEE PAGAHGFVRA MDWELGGIET EGESLKVEFK
LPYPEGGFPE WPHQVDLTLT LRLDDQLHIS LTSHNRGTDT VSISQALHSY FAVSDVRNVR
VEGVDGLDYI ETLDDWKTFT QQGDLRFAGE TDRIYLDAPA QLSIVDPAWE RRIVLTTTGS
RTAVIWNPWI DRAAALSDMD NDGWQRMLCI ETANVMSDVM NLAPDASHTM GVSVGSQPL