Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5616 |
Symbol | |
ID | 3717692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6290748 |
End bp | 6292046 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | general substrate transporter |
Protein accession | YP_351344 |
Protein GI | 77461837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.68439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.433178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAG CGCCCTCGAG CCTCGCGCAG CCCGACCAAC CCGCACGACC GTTGACCCGC AATGACTACA AGACTCTGTC GCTATCGGCC CTGGGGGGCG CGCTGGAGTT CTACGATTTC ATCATCTTCG TGTTCTTTGC CACCGTGGTC GGCAAATTGT TCTTCCCGGC CGACATGCCC GAGTGGCTGC GCCTGATGCA GACTTTCGGC ATCTTCGCCG CCGGTTACCT CGCGCGGCCG CTGGGCGGGA TCGTGATGGC GCACTTCGGC GACCTGCTGG GGCGCAAGAA AATGTTCACC CTGAGCATTT TCATGATGGC CGTGCCGACC CTGATCATGG GCCTGCTGCC GACCTACGCG CAGATCGGCC TGTGGGCGCC GATTCTGTTG CTGTTGATGC GCGTCATTCA GGGCGCGGCT ATTGGCGGTG AGGTTCCGGG GGCGTGGGTC TTCGTTTCCG AACACGTGCC CGGCAAGCAC ATCGGCTACG CCTGCGGCAC TCTGACCAGC GGCCTGACGG CGGGTATCCT GCTCGGCTCG CTGGTCGCCA CTGCGATCAA CAGCATCTAT ACCCCAACGG AAGTCTCGGA TTACGCCTGG CGGATCCCGT TCCTGTTGGG TGGCGTGTTC GGTCTGTTCT CGGTCTACCT GCGTCGCTGG CTGCACGAAA CCCCGGTGTT CGCCGAACTG CAACAGCGCA AGGCGCTGGC CGAAGAAGTG CCGCTGCGCG CCGTGCTGCG TGACCACCGC GGGGCGATCG CGGTGTCGAT GCTGCTGACC TGGCTGCTAT CCGCCGGCAT CGTCGTGGTG ATCCTGATGA CCCCGACCGT GCTGCAGACG GTCTATCACT TCTCGCCGAC TACCGCGCTG CAATCCAACA GCCTGGCGAT CGTGTTTCTG AGCTTCGGCT GCATCATTTC CGGTGCGCTG GCGGATCGCT TTGGCGCCGG TCGCGTGTTC GTATTCGGTT GCCTGGGCTT GCTGGCCAGT TCCTGGACGT TCTATCACAG TCTCGCCGAT CACCCGGACT GGCTGTTCCC GCTGTACGCG CTGACCGGTT TCCTGGTCGG CACCATCGGC GCGGTGCCAT ATGTGATGGT GAAGGCGTTT CCGCCGGTGG TGCGCTTCAG TGGTCTGTCC TTCTCTTATA ACGTCGCTTA CGCGATCTTC GGCGGCCTGA CCCCGATGGT CGTCAGCCTG CTGCTGAAAG AAAGCGCGAT GGGGCCTGCC TACTATGTGG CGGTGCTGTG CGGGATGGGG ATCCTGGTCG GCGCGTGGTT GTGGAGCAAA GGTCGCTAA
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Protein sequence | MTTAPSSLAQ PDQPARPLTR NDYKTLSLSA LGGALEFYDF IIFVFFATVV GKLFFPADMP EWLRLMQTFG IFAAGYLARP LGGIVMAHFG DLLGRKKMFT LSIFMMAVPT LIMGLLPTYA QIGLWAPILL LLMRVIQGAA IGGEVPGAWV FVSEHVPGKH IGYACGTLTS GLTAGILLGS LVATAINSIY TPTEVSDYAW RIPFLLGGVF GLFSVYLRRW LHETPVFAEL QQRKALAEEV PLRAVLRDHR GAIAVSMLLT WLLSAGIVVV ILMTPTVLQT VYHFSPTTAL QSNSLAIVFL SFGCIISGAL ADRFGAGRVF VFGCLGLLAS SWTFYHSLAD HPDWLFPLYA LTGFLVGTIG AVPYVMVKAF PPVVRFSGLS FSYNVAYAIF GGLTPMVVSL LLKESAMGPA YYVAVLCGMG ILVGAWLWSK GR
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