Gene Pfl01_5616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5616 
Symbol 
ID3717692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6290748 
End bp6292046 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content63% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_351344 
Protein GI77461837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.68439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.433178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAG CGCCCTCGAG CCTCGCGCAG CCCGACCAAC CCGCACGACC GTTGACCCGC 
AATGACTACA AGACTCTGTC GCTATCGGCC CTGGGGGGCG CGCTGGAGTT CTACGATTTC
ATCATCTTCG TGTTCTTTGC CACCGTGGTC GGCAAATTGT TCTTCCCGGC CGACATGCCC
GAGTGGCTGC GCCTGATGCA GACTTTCGGC ATCTTCGCCG CCGGTTACCT CGCGCGGCCG
CTGGGCGGGA TCGTGATGGC GCACTTCGGC GACCTGCTGG GGCGCAAGAA AATGTTCACC
CTGAGCATTT TCATGATGGC CGTGCCGACC CTGATCATGG GCCTGCTGCC GACCTACGCG
CAGATCGGCC TGTGGGCGCC GATTCTGTTG CTGTTGATGC GCGTCATTCA GGGCGCGGCT
ATTGGCGGTG AGGTTCCGGG GGCGTGGGTC TTCGTTTCCG AACACGTGCC CGGCAAGCAC
ATCGGCTACG CCTGCGGCAC TCTGACCAGC GGCCTGACGG CGGGTATCCT GCTCGGCTCG
CTGGTCGCCA CTGCGATCAA CAGCATCTAT ACCCCAACGG AAGTCTCGGA TTACGCCTGG
CGGATCCCGT TCCTGTTGGG TGGCGTGTTC GGTCTGTTCT CGGTCTACCT GCGTCGCTGG
CTGCACGAAA CCCCGGTGTT CGCCGAACTG CAACAGCGCA AGGCGCTGGC CGAAGAAGTG
CCGCTGCGCG CCGTGCTGCG TGACCACCGC GGGGCGATCG CGGTGTCGAT GCTGCTGACC
TGGCTGCTAT CCGCCGGCAT CGTCGTGGTG ATCCTGATGA CCCCGACCGT GCTGCAGACG
GTCTATCACT TCTCGCCGAC TACCGCGCTG CAATCCAACA GCCTGGCGAT CGTGTTTCTG
AGCTTCGGCT GCATCATTTC CGGTGCGCTG GCGGATCGCT TTGGCGCCGG TCGCGTGTTC
GTATTCGGTT GCCTGGGCTT GCTGGCCAGT TCCTGGACGT TCTATCACAG TCTCGCCGAT
CACCCGGACT GGCTGTTCCC GCTGTACGCG CTGACCGGTT TCCTGGTCGG CACCATCGGC
GCGGTGCCAT ATGTGATGGT GAAGGCGTTT CCGCCGGTGG TGCGCTTCAG TGGTCTGTCC
TTCTCTTATA ACGTCGCTTA CGCGATCTTC GGCGGCCTGA CCCCGATGGT CGTCAGCCTG
CTGCTGAAAG AAAGCGCGAT GGGGCCTGCC TACTATGTGG CGGTGCTGTG CGGGATGGGG
ATCCTGGTCG GCGCGTGGTT GTGGAGCAAA GGTCGCTAA
 
Protein sequence
MTTAPSSLAQ PDQPARPLTR NDYKTLSLSA LGGALEFYDF IIFVFFATVV GKLFFPADMP 
EWLRLMQTFG IFAAGYLARP LGGIVMAHFG DLLGRKKMFT LSIFMMAVPT LIMGLLPTYA
QIGLWAPILL LLMRVIQGAA IGGEVPGAWV FVSEHVPGKH IGYACGTLTS GLTAGILLGS
LVATAINSIY TPTEVSDYAW RIPFLLGGVF GLFSVYLRRW LHETPVFAEL QQRKALAEEV
PLRAVLRDHR GAIAVSMLLT WLLSAGIVVV ILMTPTVLQT VYHFSPTTAL QSNSLAIVFL
SFGCIISGAL ADRFGAGRVF VFGCLGLLAS SWTFYHSLAD HPDWLFPLYA LTGFLVGTIG
AVPYVMVKAF PPVVRFSGLS FSYNVAYAIF GGLTPMVVSL LLKESAMGPA YYVAVLCGMG
ILVGAWLWSK GR