Gene Pfl01_5613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5613 
Symbol 
ID3717689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6285448 
End bp6287118 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content63% 
IMG OID 
Productphosphate ABC transporter permease 
Protein accessionYP_351341 
Protein GI77461834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.207381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACAGA ACTCCCTGAA AGGATGGTTC AAGAGCGGCG CCCCGGGCGT CTGGATCAGC 
GGTGGCGCGG TGTCCATCGC GGTCATCATG ACCATTGGCC TGCTGGCGGT GATTGCCGTG
CGCGGTCTGG GTCACTTCTG GCCGGCGGAT CTGATCCACG CCAGCTATGA CGTACCGGGC
CAGGGCCAGC ATCTGGTCGT GGGCGAGGTG GTGCAGAAAG AAGAAGTGCC GCGCGCCCGT
CTGAAGAGCG CCGGCCTGCC GGTGCCGGAC GAAGGTCCGG AATTCATGAC CCGCGAGCTG
ATCAAGGTCG GTAACCGTGA CCTGAACGGC AACGACTTCA CCTGGATCGT CGGCGAGTGG
CTGACCGACC AGAAGAATCC GCCGGAGCTG ATGGCGCTGG AGCGTCGTGA GTGGGGCAAC
TTCTACGGCT ACCTGGTCAA CGTCAAACAG GACGGCAAGG TGATCGCCGA AGGCGAAGCC
GCCTGGCCTG AGCTGCAAGC GCGGATCGAT CGCGTGAACA AACTTGCCGC CCAGCTCAAG
ACTCTGGAAA AAGTCGATAT CGGTGCGATC AACGCCGGCC TCGAGCGCAT CCGTCTGCAC
GGTCGCAAGC TGGAACTGGA AGGCAAGCTC GACGCCACCG CACAAGCGGA CATGGAATCC
GAGCGCGCCG AGCTGAACGC CCGCTATCAG GACATCGAGG CTCGTCTGGC CGACCTGCAC
GCGCAGTTCA ACCGTGACGC CTTGACCGCT CGTGATGCGA ACGGCAAGGA AATCGAAATC
GGCCTGGGCA AAGTGGTTCA CGCCTACCAG CCGAACGCGA TGGGTACGTT CACCAAGATC
GGTTTCTACT TCAGCAAGGT CTGGGAATTC CTGTCCGACG ACCCGCGTGA AGCGAACACC
GAAGGCGGGA TTTTCCCGGC GATCTTCGGC ACCGTGATGA TGACCCTGAT CATGGCGATG
ATCGTGACCC CGTTCGGCGT GCTGGCGGCG GTATACCTGC GTGAATACGC CAAGCAGAAC
ACCCTGACCC GGGTGATCCG GATCGCGGTG AATAACCTGG CGGGTGTTCC GGCGATTGTT
TACGGCGTGT TCGGTCTGGG CTTCTTCGTC TACGTGCTGG GTGGCTCGCT CGACCGTCTG
TTCTTCCCTG AAGCGCTGCC GGCACCGACC TTCGGTACGC CGGGTCTGCT CTGGGCTTCG
TTGACCCTGG CGCTGCTGGC GGTGCCGGTG GTGATCGTGG CCACTGAAGA AGGTCTGGCG
CGGATTCCTC GCACCGTGCG TGAAGGCTCG CTGGCTCTGG GCGCGACCAA GGCTGAAACC
CTGTGGAAGA TCGTTCTGCC GATGGCCAGT CCGGCCATGA TGACCGGCAT GATCCTCGCC
GTGGCCCGCG CCGCCGGTGA AGTGGCGCCG CTGATGCTGG TGGGTGTGGT GAAACTGGCG
CCGTCGCTGC CGGTGGACGG CAACTACCCG TACCTGCACC TGGATCAGAA GATCATGCAC
CTGGGCTTCC ACATCTATGA CGTCGGCTTC CAGAGCCCGA ACGTCGAGGC CGCGCGGCCG
CTGGTGTACG CCACGGCGCT GTTGCTGGTG CTGGTGATCG CCACCCTGAA CCTGTCGGCG
GTGTACATCC GTAACCACCT GCGCGAGAAG TACAAGGCGC TGGACAGCTG A
 
Protein sequence
MKQNSLKGWF KSGAPGVWIS GGAVSIAVIM TIGLLAVIAV RGLGHFWPAD LIHASYDVPG 
QGQHLVVGEV VQKEEVPRAR LKSAGLPVPD EGPEFMTREL IKVGNRDLNG NDFTWIVGEW
LTDQKNPPEL MALERREWGN FYGYLVNVKQ DGKVIAEGEA AWPELQARID RVNKLAAQLK
TLEKVDIGAI NAGLERIRLH GRKLELEGKL DATAQADMES ERAELNARYQ DIEARLADLH
AQFNRDALTA RDANGKEIEI GLGKVVHAYQ PNAMGTFTKI GFYFSKVWEF LSDDPREANT
EGGIFPAIFG TVMMTLIMAM IVTPFGVLAA VYLREYAKQN TLTRVIRIAV NNLAGVPAIV
YGVFGLGFFV YVLGGSLDRL FFPEALPAPT FGTPGLLWAS LTLALLAVPV VIVATEEGLA
RIPRTVREGS LALGATKAET LWKIVLPMAS PAMMTGMILA VARAAGEVAP LMLVGVVKLA
PSLPVDGNYP YLHLDQKIMH LGFHIYDVGF QSPNVEAARP LVYATALLLV LVIATLNLSA
VYIRNHLREK YKALDS