Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5598 |
Symbol | |
ID | 3713514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6272632 |
End bp | 6273303 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351326 |
Protein GI | 77461819 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAAT TCACTCGGCC CGTCAAAAAA CACACGGGGT TCGTCTTCGG ATTGCTGTTG GTGCTTTGCA CTCAAAGTCA TGCACAACCG ATCACCAAAC GGCCTTGGTA TCTCGGCTTC GGAGCACCCG CCTACATGGA GGTCTGGATT GAAACGGCCG ACGTGGTGGA TATCCGTGAA CGTGTGTTCA AACGCGCCGG AGCCGGGATT GCCTCGGTGA ACACACCCGC CGACAACAAG GGCAAGCCCG CAGGCTGGCC TGACAGCCCC GGTAGTGGCG GCGGACGTGA CGTCACTGGT GCCGATCTTC CCCGCTTGAT CTATGTGCGA TGGCAATCAC TGGCTGAGCC TCAAACCTAT GAGGCCTACA TTGTGATTCC CGAATCTGCG CGGGAAATCA TGCACAAACC GGAAAAGGCG TACTGCAGAC TGGATGGCAA ATGGATCACG GATTACCGCG ATCGCGTAAC TATTGGATTG GCGCCCGGCG GCATTGCCAA GGTTTGGCAG CGTGGGCCTT GTCTCAAGCC TGTCGAGATT GCTCGGGTTG AAGGGAGCAT CGTCAAGCAG GGGCCGTATC AAGGGAAAAA TGGAGGACGC TACGCGCTAC CTCTTTCACC GGAGTCCAAA ACCTACATCG AAAAATACGG CATCCCCTTC GGGAGCTGGT AA
|
Protein sequence | MNKFTRPVKK HTGFVFGLLL VLCTQSHAQP ITKRPWYLGF GAPAYMEVWI ETADVVDIRE RVFKRAGAGI ASVNTPADNK GKPAGWPDSP GSGGGRDVTG ADLPRLIYVR WQSLAEPQTY EAYIVIPESA REIMHKPEKA YCRLDGKWIT DYRDRVTIGL APGGIAKVWQ RGPCLKPVEI ARVEGSIVKQ GPYQGKNGGR YALPLSPESK TYIEKYGIPF GSW
|
| |