Gene Pfl01_5596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5596 
Symbol 
ID3713512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6267005 
End bp6268567 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content62% 
IMG OID 
ProductImpA-like 
Protein accessionYP_351324 
Protein GI77461817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACT CAAGCAAACT TTCCGCCCAT TACCTCGAAC TCGCTAAAGT CTCTGTTTCC 
AAAGAGAATT TTGCGGGCGA AGACGTTCGC TTTTCGAGCG AATTCGAGGC GCTGGAAAGC
GAGCTGGCCA AAGCCTCGTC GATGCACGAA AGCGGGCAGA TCGACTGGCT GAAAATTCGC
GAAAACAGCG AAAACCTCCT GCGTACCCAA TCCAAGGATT TGCGTGTCGG CGCCTGGCTG
ACGTGGTCGC TGTACCAGCG TGAATCCTTC CCCGGCCTGC TGGCCGGCCT CGGTCTGCTG
CACCACTTGT CGGAAAACAA TTGGGCCGAA GTTCACCCGC TCAAACCCCG CACCCGGGCC
GCCGCCATCG GCTGGCTGGT GCCGCGTCTT GAGCAGGTCA TCACCGAGAA CATCGCGATC
AAGGAACAGC TGCCGATGTT CCGGCAACTG TCCGAGCATC TGTCCGGTCT CGACGCCGCC
TGCACCGAGC ATCTGGGCGA TGATGCGCCA CTGCTGCTGC CGCTTTCCCG CCGTCTGAAA
ACCATGATCC AGCGCGCCGC CGACAACCAG CCGGCACCCG GTGTTGTGGG CGCGGCGGTG
GCGCAGGTCA AGCAGGCCGC CAGCCAGTTG CTGGCGCCGG GCGCGCCGAT CGACAACGAG
AAAGAAGCCC ACAAGGCCCT GCGTGCACAG CAGGAAAGCG CCCGCCCGTT GTGCGCCTGG
TGGCTCAAGC AGAAAGCTAC CGACCTGCGC GCCCTGCGCC TCAACCGCAC CTTGCTGTGG
ATGACGATCG ACGCGGTGCC CGAGCGCAAC GCCGAGCAGA TCACCGTGCT GCGCGGGTTG
CCGGTCGACA AGCTCAAGCA GTATCAGGAC CGTTTCGATC AGGGCAAATA CGCCGACCTG
CTGGTGGAAC TGGAGGCGAG CCTGGCGAAG GCGCCGTTCT GGTTCGATGG CCAGAGGATG
GTCTGGGAAT GTCTCCAGAA CCTCAACGCC GAGCTGGCCA TGCGCGAAGT GGAAATCCAC
TTCGCGCTTT TGATTCAACG CCTGCCCGGC ATCATCGAGC TGCGTTTCCA TGACGGCGCG
CCGTTCGCCG ATCCGTCCAC CCGGGCGTGG ATCGCCGCCA ACGTCATGCC GCACCTGCAA
AGCGCCAGCG CGCCGCGCAA GGTCGAAACC GAAAACGCCG AAACCCAGCC GGCCTGGGAA
AAGGCCCTCG AAGAAGTCCA GCCGATCCTG CGCAAGGAAG GCCTCAAGCC CGCAGTGCAG
ATCCTCAAGC AGGGGCTGCA ATCGGCGCAC GGCGGGCGCG AACGCTTCTT CTGGCAGTTC
GCCCTCGCGC GGCTGTGTTT CCTGGCCAAG AAATACGAAC TCGCCAAGAA CCAGCTCGAA
ACCCTCGATC AGACATTACA GGACTCAGGC CTGCACGCCT GGGAGCCCGA TCTTGCATTG
GAAGTGCTGC ACCTGCTGCA CAGTTGCTGC GAGTTGTTAC CGCAGAACCA TGCCGTACGT
GAACGCAAGG AAGAGATTTA TCGCAGGCTG TGCCACCTCG ATCTCGAAGT GGTACTCGAA
TAG
 
Protein sequence
MSYSSKLSAH YLELAKVSVS KENFAGEDVR FSSEFEALES ELAKASSMHE SGQIDWLKIR 
ENSENLLRTQ SKDLRVGAWL TWSLYQRESF PGLLAGLGLL HHLSENNWAE VHPLKPRTRA
AAIGWLVPRL EQVITENIAI KEQLPMFRQL SEHLSGLDAA CTEHLGDDAP LLLPLSRRLK
TMIQRAADNQ PAPGVVGAAV AQVKQAASQL LAPGAPIDNE KEAHKALRAQ QESARPLCAW
WLKQKATDLR ALRLNRTLLW MTIDAVPERN AEQITVLRGL PVDKLKQYQD RFDQGKYADL
LVELEASLAK APFWFDGQRM VWECLQNLNA ELAMREVEIH FALLIQRLPG IIELRFHDGA
PFADPSTRAW IAANVMPHLQ SASAPRKVET ENAETQPAWE KALEEVQPIL RKEGLKPAVQ
ILKQGLQSAH GGRERFFWQF ALARLCFLAK KYELAKNQLE TLDQTLQDSG LHAWEPDLAL
EVLHLLHSCC ELLPQNHAVR ERKEEIYRRL CHLDLEVVLE