Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5596 |
Symbol | |
ID | 3713512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6267005 |
End bp | 6268567 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | ImpA-like |
Protein accession | YP_351324 |
Protein GI | 77461817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACT CAAGCAAACT TTCCGCCCAT TACCTCGAAC TCGCTAAAGT CTCTGTTTCC AAAGAGAATT TTGCGGGCGA AGACGTTCGC TTTTCGAGCG AATTCGAGGC GCTGGAAAGC GAGCTGGCCA AAGCCTCGTC GATGCACGAA AGCGGGCAGA TCGACTGGCT GAAAATTCGC GAAAACAGCG AAAACCTCCT GCGTACCCAA TCCAAGGATT TGCGTGTCGG CGCCTGGCTG ACGTGGTCGC TGTACCAGCG TGAATCCTTC CCCGGCCTGC TGGCCGGCCT CGGTCTGCTG CACCACTTGT CGGAAAACAA TTGGGCCGAA GTTCACCCGC TCAAACCCCG CACCCGGGCC GCCGCCATCG GCTGGCTGGT GCCGCGTCTT GAGCAGGTCA TCACCGAGAA CATCGCGATC AAGGAACAGC TGCCGATGTT CCGGCAACTG TCCGAGCATC TGTCCGGTCT CGACGCCGCC TGCACCGAGC ATCTGGGCGA TGATGCGCCA CTGCTGCTGC CGCTTTCCCG CCGTCTGAAA ACCATGATCC AGCGCGCCGC CGACAACCAG CCGGCACCCG GTGTTGTGGG CGCGGCGGTG GCGCAGGTCA AGCAGGCCGC CAGCCAGTTG CTGGCGCCGG GCGCGCCGAT CGACAACGAG AAAGAAGCCC ACAAGGCCCT GCGTGCACAG CAGGAAAGCG CCCGCCCGTT GTGCGCCTGG TGGCTCAAGC AGAAAGCTAC CGACCTGCGC GCCCTGCGCC TCAACCGCAC CTTGCTGTGG ATGACGATCG ACGCGGTGCC CGAGCGCAAC GCCGAGCAGA TCACCGTGCT GCGCGGGTTG CCGGTCGACA AGCTCAAGCA GTATCAGGAC CGTTTCGATC AGGGCAAATA CGCCGACCTG CTGGTGGAAC TGGAGGCGAG CCTGGCGAAG GCGCCGTTCT GGTTCGATGG CCAGAGGATG GTCTGGGAAT GTCTCCAGAA CCTCAACGCC GAGCTGGCCA TGCGCGAAGT GGAAATCCAC TTCGCGCTTT TGATTCAACG CCTGCCCGGC ATCATCGAGC TGCGTTTCCA TGACGGCGCG CCGTTCGCCG ATCCGTCCAC CCGGGCGTGG ATCGCCGCCA ACGTCATGCC GCACCTGCAA AGCGCCAGCG CGCCGCGCAA GGTCGAAACC GAAAACGCCG AAACCCAGCC GGCCTGGGAA AAGGCCCTCG AAGAAGTCCA GCCGATCCTG CGCAAGGAAG GCCTCAAGCC CGCAGTGCAG ATCCTCAAGC AGGGGCTGCA ATCGGCGCAC GGCGGGCGCG AACGCTTCTT CTGGCAGTTC GCCCTCGCGC GGCTGTGTTT CCTGGCCAAG AAATACGAAC TCGCCAAGAA CCAGCTCGAA ACCCTCGATC AGACATTACA GGACTCAGGC CTGCACGCCT GGGAGCCCGA TCTTGCATTG GAAGTGCTGC ACCTGCTGCA CAGTTGCTGC GAGTTGTTAC CGCAGAACCA TGCCGTACGT GAACGCAAGG AAGAGATTTA TCGCAGGCTG TGCCACCTCG ATCTCGAAGT GGTACTCGAA TAG
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Protein sequence | MSYSSKLSAH YLELAKVSVS KENFAGEDVR FSSEFEALES ELAKASSMHE SGQIDWLKIR ENSENLLRTQ SKDLRVGAWL TWSLYQRESF PGLLAGLGLL HHLSENNWAE VHPLKPRTRA AAIGWLVPRL EQVITENIAI KEQLPMFRQL SEHLSGLDAA CTEHLGDDAP LLLPLSRRLK TMIQRAADNQ PAPGVVGAAV AQVKQAASQL LAPGAPIDNE KEAHKALRAQ QESARPLCAW WLKQKATDLR ALRLNRTLLW MTIDAVPERN AEQITVLRGL PVDKLKQYQD RFDQGKYADL LVELEASLAK APFWFDGQRM VWECLQNLNA ELAMREVEIH FALLIQRLPG IIELRFHDGA PFADPSTRAW IAANVMPHLQ SASAPRKVET ENAETQPAWE KALEEVQPIL RKEGLKPAVQ ILKQGLQSAH GGRERFFWQF ALARLCFLAK KYELAKNQLE TLDQTLQDSG LHAWEPDLAL EVLHLLHSCC ELLPQNHAVR ERKEEIYRRL CHLDLEVVLE
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