| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5592 |
|---|
| Symbol | |
|---|
| ID | 3713508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 6263127 |
|---|
| End bp | 6264536 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | PAAR |
|---|
| Protein accession | YP_351320 |
|---|
| Protein GI | 77461813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGCA AACCAGCAGC ACGCGTATCC GACCCCACCG CTTGCCCGCT CCCCGGCCAC
GGCACCAACC CGATCGCCGC CGGTTCCGGC GACGTGTTCT TCGACGGCCT GCCAGCGGCC
CGCCAGGGCG ATGCCTCGGC GTGTGGCAGT GCATTGGTCG GCGACCTTGC GACCACGGTT
CTGATCAATG GCAAGCCGGC CGCCACCGTA GGTTCAGTCG GGGCCCATGG CAACAAGGTC
ACTGCCGGCT CCGGGACGGT AATCATCGGG AATTCGCATA CGCCTGCACC GTTTTCGGGG
CTTGCTGCCC TGGCGGTCGC CGCTGCTCTG GAATACCGAC TGGGTCTGAA GTCGGGTGGC
AACTCGGTTT TGACCCCGCT GGAAATACCG GACTTCGATG AACTGAAGTC CGGAACATCG
AAAAACCGCG AACTGGTCGA CTTCGTCGTC GAGAACCGGA TGGACGCGGC AGACAGTGTG
AAGCTGGAAG TGCTGGACGG CGAAAAGCCG GTCTACACCG AAGCCAATAC CGCCCCGTTC
TTGCCCCCTG GCAAGCACCC GTGGCAATGG GATGGGTACG ACACTGCCGG CATCCTCGAC
ACCAAAATCC TGAAAAGCCC GAACCTCAAA GTTCGTCTGA CCGCGACCGG AGCGGGCAAG
CAGCAAGTCA CCGAAGTGAA GCTCACTTGT TCGGCTGAAG AGGTGAAGTG GGTCGATGCG
CGTATTGATC GCAATGCCAA GACCGTGGAA GTGACGCTGC GCCCGAGCTT CTCGGAGGGT
GGCAGCACTG GTTCCACGCC TGGCCTGGTG CCTACGCCGC TCAGCACTTT GCTGGGTTGG
GCCAAGGAGG GCATCGAATT GTATTGGTCA CGCAATGGTT CGCGCGGTGG TGGCATTGCC
GAAGGAATCG CGACCAGCAA AGGGGTCTAC AAAGTCACGG TCAAGGCCGA GGTCAACGTC
GAGCCAAAGG CCGGGAACTT CCCGTTGATT GACTCGTTGT CAGCGGACTT CGGTCGTTCG
ACCAGCCTGG CAATTGCCCG TAAGGTTTAC CACAACGCTG GCTACGCCTT TGACCAACTC
GTCAAGCGTC AAGGCCTTAC GGCTGCGGAT GCTGCCAACT ATGCGCAGGA AGAGTTCAAA
GAGACCTCGG CCCATGAATT CGGGCATCTG ATTCTCAACG AATACGGTGG TGGGCTGATC
CCGAACTACT CGTGGACGCA CAAAGAAACC TCAACGTTGA TGCAAAACCC CAAGGCAAAC
CACCCGACAC CGAGCACGGG TGAGGTGGAT GTCATGCATT ACTTCAGCAG CTACACCCAG
ACGTCCACCA ACCTGCAGAA GCGCATGGCC GCTTCTGAAC AGGACGTGAA AAGCCTGCTT
TGGTTGGCCA GGGTTGAATT CAATGACTAG
|
|---|
| Protein sequence | MSGKPAARVS DPTACPLPGH GTNPIAAGSG DVFFDGLPAA RQGDASACGS ALVGDLATTV
LINGKPAATV GSVGAHGNKV TAGSGTVIIG NSHTPAPFSG LAALAVAAAL EYRLGLKSGG
NSVLTPLEIP DFDELKSGTS KNRELVDFVV ENRMDAADSV KLEVLDGEKP VYTEANTAPF
LPPGKHPWQW DGYDTAGILD TKILKSPNLK VRLTATGAGK QQVTEVKLTC SAEEVKWVDA
RIDRNAKTVE VTLRPSFSEG GSTGSTPGLV PTPLSTLLGW AKEGIELYWS RNGSRGGGIA
EGIATSKGVY KVTVKAEVNV EPKAGNFPLI DSLSADFGRS TSLAIARKVY HNAGYAFDQL
VKRQGLTAAD AANYAQEEFK ETSAHEFGHL ILNEYGGGLI PNYSWTHKET STLMQNPKAN
HPTPSTGEVD VMHYFSSYTQ TSTNLQKRMA ASEQDVKSLL WLARVEFND
|
|---|
| |