Gene Pfl01_5577 details

Gene Information

• Locus tag: Pfl01_5577
• ID: 3713493
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas fluorescens Pf0-1
• Kingdom: Bacteria
• Replicon accession: NC_007492
• Strand: -
• Start bp: 6246345
• End bp: 6249884
• Gene Length: 3540 bp
• Protein Length: 1179 aa
• Translation table: 11
• GC content: 63%
• Product: hypothetical protein
• Protein accession: YP_351305
• Protein GI: 77461798

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAGT TTTTCAAGAA AGTCGGCGCC TTCCTGCGCC AGACCTGGGT CTGGACCTTG 
CTGCTGGTGC TGTTCGTGGC GCTGCTGGTG TGGTTCGTCG GCCCGTTGTT GGCAGTGGAT 
GACTACAAGT TCTGGGAAAG CGCGACCTCG CGTCTGCTGA CCATCAGCGT GCTGTTCCTG 
ATCTGGGGCC TGACCATGGT CTTCGTCAGC TGGCGCGCCG GGATCCGCAA GAAAGCCGTC 
GAAGAAACCG AAGACGGCCA GGACCGTATC CGCCGCGAAG AGTTGATCGA CGAAGAGCAG 
AAAGAGTTGA AAGAGCGTTT CAAGGACGCC CTGAAAACCC TCAAGACTTC GAGCCTGTAC 
CGCGGCCGCA GCGAGCGCTG GCGCAATGAC TTGCCGTGGT ACTTGCTGAT CGGCCCGCAG 
GCCAGCGGCA AGACCAGCCT GCTGGACTTC TCCGGGCTGG AATTCCCGAT CAACAAGATC 
GACCGCAAGC TGACCCGCGA CACTCACGGC ACCCGTCATT GCGACTGGTA CTTCGCCGAC 
CACGGTGTGC TGATCGACAC CGCCGGCCGC TACCTGACCC AGCCGGATGC GGAAGTCGAC 
GGCAGCGCCT GGACCACCTT GCTGGAACTG CTGCGCAAGC GTCGTCGCGG TCGTCCGCTG 
AACGGCGTGC TGGTGACCAT TCCGGTGGAA ACCCTGACCG GTGGCAGCGA ACAGGACATC 
GAAACCCTGG CCCGCCAGGT GCGTGCGCGT CTGCAAGACG TCTATCAGAA GCTGCACGTC 
GATGTGCCGG TGTATCTGGT GCTGAGCAAG GCCGACAAGC TGCTGGGCTT CGACGAGTTC 
TTCGATCAAC TGACCCGCGA AGAAAGCGAT CAGGTGCTGG GTACCAGTTT CCGCAAGGAT 
CAGGTCGGCA CCGACGTGAC GGTACTGCGC AACGAGTTCG AAGAGCTGCT GCGTCGCCTC 
AACAGCCAGG TGATCATGCG CATGCACTCC GAGCGCGACA CCCAGCGCCG TGGCCGCATC 
CTCGACTTCC CGCACCAGAT GGGCCAGATC GGCGAGCGTC TGTGCCTGCT CGTCGATATG 
GCGTTCACCG GCAACCGCTA CCAGCGTGCG ACACAACTGC GTGGTTTCTA CCTGACCAGC 
GCACCGCACC TGACTCAGGA AATGGATTCG ACCACCGCCG GCATCGGCGC GAGTCTGGGC 
ATGAGCGCCG GCGTGTTGCC GACACTGCGC AGCGGTCGTT CGCGTTTCAT CCATCATTTG 
CTCAGCCGGG TGATTTTCCC GGAGGCCGAT CTGGCCGGTC TGGACAAGCG CGAACGCAGC 
CGCATCCACT GGGGCCAGCG TGCGTTGTAC GTCGGCGCGC TGGGTGCTCT GGTTCTGTTC 
GGCATGCTCT GGGCCGGTGG ATTCTCGGCC AACTACGAGC GTCTGGAAAA CCTGCGCAAC 
CTGGCGCAGA ACTGGACGCA GCAACGCACT TTGCTATCGC CACGCGATGA CGCCATGGGC 
GCACTGAAAA CCCTCGACAC CAGCTACGCC GCCACCCAGG TGTTCCCGAA CAAGAGCGAC 
GTGTCTTACC ACGAGCGTGT CGGTCTGTAT CAAGGCCAGG ACGTCAGTCC GGTGGTCAAG 
GAGGCGTACG AGCGCGAGCT TGAAAAGCAA CTGCTGCCGC GCGTCGCGAC GATGCTCGAA 
GGCCAGATCC GCGCCAACAT GAAGGACCGC GAAAAGCTGA TCAACAGCCT GCGTGCGTAC 
CTGATGCTGA ACATGAAGGA TCGTCGTGAC GCGGCATGGC TCAAGGACTG GATCGCGGCT 
GACTGGTCGC AGCGCTACAC CGGAAACACT GCGGTGCAGA ACGGTCTGAA CACGCACCTT 
GAGCGTCTGC TGCAGCAGCC GTTTATCTAC CCGCTCAACG AGCAACTGGT GACCCAGGCG 
CGTCAGGTGC TGCGCAGCGA ATCGCTGGCG ACCGTGGTTT ACCGCATGCT CCGCGAGCAG 
GCGCGCAACC TGCCGGATTA CCGTTTCAGC CAGCACCTCG GGCCGCAAGG CTCGCTGTTC 
ATCGGTACCG AATACGTGAT CCCGGGCTTC TACACCCAGA CCGGTTATCA GCAGTATTTC 
TCGGTACAAG GCGCGTCGCT GGTGACCGAC ATCCTGCGTG ACAACTGGGT GCTGGGCGAA 
GGCGCCGGCA TCAGCGACAT GGACTTGCGT CGCCTGATGG TCGAGCTGGA GCAACTGTAC 
TTCCGCGATT ACGCCAACTA CTGGAGCGAG GCCGTTGGCC AGGTAGCACT GCCGCCGATC 
AGCGATGCCG GTGAAGGCGC CGAGCAACTG GCGGGCCTGA CCTCGGCCAA CTCGCCGGTG 
CTGGCGCTGC TGACCGAAGT GCGCGAGAAC ACCCGCTTCC CGGCAGCTGC CGATCCGGTG 
GACGAGGCGG GTGACGCGGC TGATGCGCTG GCCGGACAGA AAGGCAAACT GGGCAAGGTG 
GGCAAACTCG CCGCGGCGGC AGCGGATAAG GCCTCGGCCC TGAACGTGGC GAAGAACCTG 
CCGGACACCG CCAAGAAGTC CCTGCAACGT CGCTTCGAGC CGCTGCACAA GTTGCTCGAC 
GACAACAACG GCCCGGCCGC TGACCTGACC CCGGCCTTCA CCGCGCTCAA CGACCTGCAA 
CTGCAACTGG CGGGCCTCGC CCGTTCCAGC ACGCCGGAGC AGGCCGCGTT CGAACTGGCC 
AAGACCCGCA TGAGCGGCCA GCGTGATGCG CTGACCAACC TGCGCAATGC ATCGGGTCGT 
CTGCCGCGTC CGTTGAGCGT GTGGTTCAAC GTGCTGGCTG AGGACTCGTG GCGCCTGGTG 
CTCAACGATG CCTACCAGTA CCTGAACGGC CGTTATCAGA ACGAGCTGTA CAGCGTGTAT 
GGCAAGACGA TCAACAAGCG TTACCCGTTC AGCGCCTCGA GCACCAGCGA TGTGGCGATC 
AGCGATTTCC GCGAGTTCTT CCGGGCTCAA GGCACCATCG ACCGCTTCTT CGACAGCTAC 
ATGCGTCCGT TCGTCAGCGG TGATCCGGGC AACTACCGGA TGCGCAGCAT CGACGGTCGC 
AGCCTGCCGG TGTCCAAGGT CTTCCTCGAC CAGATGGCGG CGGCCCTGAA CATCCGTCAG 
AGCTTCTTCT CGATCAATCC GGCCGAGCCG ACCGTGCAGT TCAAGCTGGA GCCGTACACC 
CTCGATCCGG CCGTCAGCCG TTCCGAGTTC AAGTTCGGTG ACAAGACCAT GGAATACCGC 
CACGGTCCGA TCCTGCCCAT GACCTTCAAG TGGCCGACCG ATGCTGAAGA CGGTCGCACC 
AGCCTGGTCA TGGACAAGAT GGCCGGGCGC CCGATCGGCA TCGAGAAGAA CTCCGGCCCG 
TGGTCGCTGT TCCGTCTGTT CGACCTGATG CAGACGGAGT ACCTGACCGG TCGCGACGTG 
CTGGTGCTGA AAGCCGATGT GGGTGGCCTG CGCGCCAACT ACCTGCTGAC CAGCCAGCGC 
ACGCCGAACC CGTTCGACAT GGGCGTAATG CGTACCTTCC GTATGCCGGT GCAGCTCTGA 

 

Protein sequence

MKKFFKKVGA FLRQTWVWTL LLVLFVALLV WFVGPLLAVD DYKFWESATS RLLTISVLFL 
IWGLTMVFVS WRAGIRKKAV EETEDGQDRI RREELIDEEQ KELKERFKDA LKTLKTSSLY 
RGRSERWRND LPWYLLIGPQ ASGKTSLLDF SGLEFPINKI DRKLTRDTHG TRHCDWYFAD 
HGVLIDTAGR YLTQPDAEVD GSAWTTLLEL LRKRRRGRPL NGVLVTIPVE TLTGGSEQDI 
ETLARQVRAR LQDVYQKLHV DVPVYLVLSK ADKLLGFDEF FDQLTREESD QVLGTSFRKD 
QVGTDVTVLR NEFEELLRRL NSQVIMRMHS ERDTQRRGRI LDFPHQMGQI GERLCLLVDM 
AFTGNRYQRA TQLRGFYLTS APHLTQEMDS TTAGIGASLG MSAGVLPTLR SGRSRFIHHL 
LSRVIFPEAD LAGLDKRERS RIHWGQRALY VGALGALVLF GMLWAGGFSA NYERLENLRN 
LAQNWTQQRT LLSPRDDAMG ALKTLDTSYA ATQVFPNKSD VSYHERVGLY QGQDVSPVVK 
EAYERELEKQ LLPRVATMLE GQIRANMKDR EKLINSLRAY LMLNMKDRRD AAWLKDWIAA 
DWSQRYTGNT AVQNGLNTHL ERLLQQPFIY PLNEQLVTQA RQVLRSESLA TVVYRMLREQ 
ARNLPDYRFS QHLGPQGSLF IGTEYVIPGF YTQTGYQQYF SVQGASLVTD ILRDNWVLGE 
GAGISDMDLR RLMVELEQLY FRDYANYWSE AVGQVALPPI SDAGEGAEQL AGLTSANSPV 
LALLTEVREN TRFPAAADPV DEAGDAADAL AGQKGKLGKV GKLAAAAADK ASALNVAKNL 
PDTAKKSLQR RFEPLHKLLD DNNGPAADLT PAFTALNDLQ LQLAGLARSS TPEQAAFELA 
KTRMSGQRDA LTNLRNASGR LPRPLSVWFN VLAEDSWRLV LNDAYQYLNG RYQNELYSVY 
GKTINKRYPF SASSTSDVAI SDFREFFRAQ GTIDRFFDSY MRPFVSGDPG NYRMRSIDGR 
SLPVSKVFLD QMAAALNIRQ SFFSINPAEP TVQFKLEPYT LDPAVSRSEF KFGDKTMEYR 
HGPILPMTFK WPTDAEDGRT SLVMDKMAGR PIGIEKNSGP WSLFRLFDLM QTEYLTGRDV 
LVLKADVGGL RANYLLTSQR TPNPFDMGVM RTFRMPVQL