Gene Pfl01_5572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5572 
Symbol 
ID3713488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6240486 
End bp6241364 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content44% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351300 
Protein GI77461793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.376373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.414864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT ACGGGTTGTT GATTTTTTTA TTGCTCGCTG CATGCGGTGA CTCAGACAAA 
GTAGGGACTG TTTCCATGGC AAACAAAACC CAGTTAATCA GTGTTGAAAT TGGTGAGGAG
ATAAGCAATC TACTTTCTAG TTCTCCTGTG TCTTTTTCAA AAGAGTGCAT TTCTGATGTG
GATATGTGCT GGTATAAAGT TAAAAAGTCA TTCGGTGATG AAGACCTTCC ATCAGTCGAG
GTGAATAAAT CTCTGCGTCT AGACCAGGTT GCGAGTGTCA GTACTGCAGT AGATGGTGAG
GTAGGCACTA CTGTGGAGAA CCTCGACTTA TCAGTTCGGA GTCTCCCGGA TGGAAGCAAG
CATGATGAGT ATCGAGCGTT TCTATACGAT CTCATAAAAG ATATAAAGAA GGCGGGCTGG
GTACACTATT ACGCACCTTC TGATCCTAGA ATTTCCGGTA GTCAAATTGG CAAGATTAAT
TCAGCTGATG AAGTCATGGG TGATAGCGTA TTAAGTCATC CGTGGCTGGA TCCGAACTAT
AATCTGGATC ATGAGCGATG GTTGAAAGTC GGTAAATTCT ACAATTGGCA TTTTTATAAG
GATGGCAATC ATCTTACGTT GCAAGCATGG CGGCGAGACT CTGATGCTGC TCCTGATGAG
CGCGGAACGT ATTTGGTAAG TTTGAGCTTC ACCACCGAGC GTGAATACTG GAGTGCTGCT
TTCACCGAGG CTGAAGATAA AAAGCGTTGG AAAGAGCTGC TGCCAGCCAA GATGAAAGAA
TATGCTGCTA TTCGGAAGTC CCGAGAAGAC AAGGCGGAAA AGGCGGGTAT TAAAATTGAC
TCAAGCTATC AAGATCCAAC CATCAAAGCA TTGAAGTAA
 
Protein sequence
MKFYGLLIFL LLAACGDSDK VGTVSMANKT QLISVEIGEE ISNLLSSSPV SFSKECISDV 
DMCWYKVKKS FGDEDLPSVE VNKSLRLDQV ASVSTAVDGE VGTTVENLDL SVRSLPDGSK
HDEYRAFLYD LIKDIKKAGW VHYYAPSDPR ISGSQIGKIN SADEVMGDSV LSHPWLDPNY
NLDHERWLKV GKFYNWHFYK DGNHLTLQAW RRDSDAAPDE RGTYLVSLSF TTEREYWSAA
FTEAEDKKRW KELLPAKMKE YAAIRKSRED KAEKAGIKID SSYQDPTIKA LK