Gene Pfl01_5571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5571 
Symbol 
ID3713487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6239015 
End bp6240409 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351299 
Protein GI77461792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.248772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCC CCTCTTTCTC TCTTCGCCCC GTGATGGTGC TTTGGCTGTA CGCCGCGGCA 
ATCGTGCATG TGCTCGCCGG TCTCACGCTG ACCTGGGCCG GTCATTCCGG ATTACTCGAC
GGCTATTTGC ACACCCTCGA ACTCGCGTTC TGGGGCGCCG ATGCGGTCCC TGCCGCCGGT
CACGAGCTGC AGGTCTGGTG GCTCGCACTG TTCGGCGCGA CGCTGCAAAG TTATTCGCTG
TACATGCTTG CGTTGGTGCA CCTCGGCAAC CGTCTTAAAA CTCCCGCAAT TTGGGGATGG
TTGATGGCGG GCGTGCTGTT ATGGGCGCCG CAGGACATGT GGCTTTCAGC TCAACAACAG
GTCTGGTCGC ATCTGTGGCT CGACGGTTTT GCGCTGCTGG TGCTGTTGCC GCCGCTGGTC
TGGTTGCTGC TCCATGATCG TCGGAAGTCT CCGCCAGAAA GGGCCGTGAG CAAATCCAAC
CCGTTTGCCG GCGGCGCCTA CAAGCGTGTG CTGATCACCG GGGGTACCGG GTTTATCGGT
GAAGCCGTGG TCAATCAGTT ACTCGACGCC GGCCACACGG TCAGCGTGTT AGCGCGTGAT
CCGTTGAAAG CGGCGAACCT GTTCGACGGT CGCGTCCGCT GTGTGCGGTC GTTGAGCGAA
CTCGACCGCG ACGAACCATT CGACGTAGTG ATCAACCTCG CCGGCGCACC GGTCGCCGGT
CCACGCTGGA GCCCCGAGCG GCAGGCGCAA TTGCTCGCCA GTCGGGTCAA CACCACTGAA
GCGTTGATGA CCTGGCTGAA AAACGCCAGG CACAAACCCG CGCTGTGGAT TCAGGCCTCG
GCCATCGGTT TCTACGGCGT GCGCGATGCC AGCGAAAGCC TCGATGAACA GGCGAGCAAG
GGTGACGGTT TCATGGCCGA GCTCTGTGCG CGTTGGGAGG CTTCGGCGCA ACCCGCCACG
CAGTTTGGCG TGCGCCAGGT GGTGCTGCGC CTCGGCGTGG TGTTCGGGCC GGGCGGTGCG
CTGCTGCCGT TGCTGATTCC GTTTCGCCTA GGTTTCGGCG GGCGGATGGG CGATGGTCAG
CAGATCATGA GTTGGGTGCA TCGCGACGAT GTGATTCAGG TGATCGCTCG ATCCTTCCAC
GATGAAAATT TGCGCGGCAC CTACAACATG GTCGCGCCTG AAACCGTCAG TCAGGCAGCG
TTCGCCGAGA ATGTTGGCAA GGTCCTCAAA CGTCCGGTGT GGTTCCACAT TCCGGCCGCG
CCAGTGCGTG CGTTAGCCGG GGAAATGGCT CAGTTGTTCT TCGACGGTCA GCGTGTGGTG
CCGCAGCGTT TGAGCGAGGC GGGCTACACG TTCCGCTATC CGACCCTCGA CGCCGCGCTG
CGCGATCTGG TCTGA
 
Protein sequence
MPAPSFSLRP VMVLWLYAAA IVHVLAGLTL TWAGHSGLLD GYLHTLELAF WGADAVPAAG 
HELQVWWLAL FGATLQSYSL YMLALVHLGN RLKTPAIWGW LMAGVLLWAP QDMWLSAQQQ
VWSHLWLDGF ALLVLLPPLV WLLLHDRRKS PPERAVSKSN PFAGGAYKRV LITGGTGFIG
EAVVNQLLDA GHTVSVLARD PLKAANLFDG RVRCVRSLSE LDRDEPFDVV INLAGAPVAG
PRWSPERQAQ LLASRVNTTE ALMTWLKNAR HKPALWIQAS AIGFYGVRDA SESLDEQASK
GDGFMAELCA RWEASAQPAT QFGVRQVVLR LGVVFGPGGA LLPLLIPFRL GFGGRMGDGQ
QIMSWVHRDD VIQVIARSFH DENLRGTYNM VAPETVSQAA FAENVGKVLK RPVWFHIPAA
PVRALAGEMA QLFFDGQRVV PQRLSEAGYT FRYPTLDAAL RDLV