Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5571 |
Symbol | |
ID | 3713487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6239015 |
End bp | 6240409 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351299 |
Protein GI | 77461792 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.248772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGCCC CCTCTTTCTC TCTTCGCCCC GTGATGGTGC TTTGGCTGTA CGCCGCGGCA ATCGTGCATG TGCTCGCCGG TCTCACGCTG ACCTGGGCCG GTCATTCCGG ATTACTCGAC GGCTATTTGC ACACCCTCGA ACTCGCGTTC TGGGGCGCCG ATGCGGTCCC TGCCGCCGGT CACGAGCTGC AGGTCTGGTG GCTCGCACTG TTCGGCGCGA CGCTGCAAAG TTATTCGCTG TACATGCTTG CGTTGGTGCA CCTCGGCAAC CGTCTTAAAA CTCCCGCAAT TTGGGGATGG TTGATGGCGG GCGTGCTGTT ATGGGCGCCG CAGGACATGT GGCTTTCAGC TCAACAACAG GTCTGGTCGC ATCTGTGGCT CGACGGTTTT GCGCTGCTGG TGCTGTTGCC GCCGCTGGTC TGGTTGCTGC TCCATGATCG TCGGAAGTCT CCGCCAGAAA GGGCCGTGAG CAAATCCAAC CCGTTTGCCG GCGGCGCCTA CAAGCGTGTG CTGATCACCG GGGGTACCGG GTTTATCGGT GAAGCCGTGG TCAATCAGTT ACTCGACGCC GGCCACACGG TCAGCGTGTT AGCGCGTGAT CCGTTGAAAG CGGCGAACCT GTTCGACGGT CGCGTCCGCT GTGTGCGGTC GTTGAGCGAA CTCGACCGCG ACGAACCATT CGACGTAGTG ATCAACCTCG CCGGCGCACC GGTCGCCGGT CCACGCTGGA GCCCCGAGCG GCAGGCGCAA TTGCTCGCCA GTCGGGTCAA CACCACTGAA GCGTTGATGA CCTGGCTGAA AAACGCCAGG CACAAACCCG CGCTGTGGAT TCAGGCCTCG GCCATCGGTT TCTACGGCGT GCGCGATGCC AGCGAAAGCC TCGATGAACA GGCGAGCAAG GGTGACGGTT TCATGGCCGA GCTCTGTGCG CGTTGGGAGG CTTCGGCGCA ACCCGCCACG CAGTTTGGCG TGCGCCAGGT GGTGCTGCGC CTCGGCGTGG TGTTCGGGCC GGGCGGTGCG CTGCTGCCGT TGCTGATTCC GTTTCGCCTA GGTTTCGGCG GGCGGATGGG CGATGGTCAG CAGATCATGA GTTGGGTGCA TCGCGACGAT GTGATTCAGG TGATCGCTCG ATCCTTCCAC GATGAAAATT TGCGCGGCAC CTACAACATG GTCGCGCCTG AAACCGTCAG TCAGGCAGCG TTCGCCGAGA ATGTTGGCAA GGTCCTCAAA CGTCCGGTGT GGTTCCACAT TCCGGCCGCG CCAGTGCGTG CGTTAGCCGG GGAAATGGCT CAGTTGTTCT TCGACGGTCA GCGTGTGGTG CCGCAGCGTT TGAGCGAGGC GGGCTACACG TTCCGCTATC CGACCCTCGA CGCCGCGCTG CGCGATCTGG TCTGA
|
Protein sequence | MPAPSFSLRP VMVLWLYAAA IVHVLAGLTL TWAGHSGLLD GYLHTLELAF WGADAVPAAG HELQVWWLAL FGATLQSYSL YMLALVHLGN RLKTPAIWGW LMAGVLLWAP QDMWLSAQQQ VWSHLWLDGF ALLVLLPPLV WLLLHDRRKS PPERAVSKSN PFAGGAYKRV LITGGTGFIG EAVVNQLLDA GHTVSVLARD PLKAANLFDG RVRCVRSLSE LDRDEPFDVV INLAGAPVAG PRWSPERQAQ LLASRVNTTE ALMTWLKNAR HKPALWIQAS AIGFYGVRDA SESLDEQASK GDGFMAELCA RWEASAQPAT QFGVRQVVLR LGVVFGPGGA LLPLLIPFRL GFGGRMGDGQ QIMSWVHRDD VIQVIARSFH DENLRGTYNM VAPETVSQAA FAENVGKVLK RPVWFHIPAA PVRALAGEMA QLFFDGQRVV PQRLSEAGYT FRYPTLDAAL RDLV
|
| |