Gene Pfl01_5564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5564 
Symbol 
ID3713480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6232319 
End bp6233311 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351292 
Protein GI77461785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.734058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAGGC TCTTAAGTTG TTTTGGTGTG CTCGGGCTTA TCGTCGGCTT GTCGACTCAG 
CCGGCATCGG CAAGTGACCC TCAAACCATC GGTGAACTGC ATCCTCCGGT GGTTGCTTCG
TTGGGTGATC AAAAGATCAC GGTGTTCTTT TTGAAGAACA ACCTCAAGGG TCAGGTCAGG
GGCGTGCATG TGCCAGGTGC CGAGATTTTC TACGCGCCCA TGAATGCGGT GAAACCTTCG
CTGAATTATG TGTGGAAGGT TGAAGGCGAA CAAATTGCCT CGGTGTTCTT CTTCGAGCGC
AAATTCCCTG AGCGAGCGGG GAAGTCCATG TTTGTCCTGA CAAAACACAA AGTTCTGCAC
GAGCATTTCG AAGGAGATTC CTATTCGGTG CTGGAATTGC CGCTCTTCAA GGACGGTGAC
CACTTGGCTT TGCAGTTCTT TCGGGGTGAC CTGCCAGATC CTGAGTTACA GAACTGCCTT
GACGGTATCA ATCGGGAAGA TGGCGTAGAA GTCGAGTGTG CTTACAAGGA TGCGGCGAGC
ATCAAGAAGT ACTTGGCGGA TCTGGATGGA AGGATGATTT CGGATTCGAA ACTGGATCAG
GGTAACCGTC AGAAGCCACT CAAAACCGAG GGTGACAAGG CGAGTGTCGC TTGCCCCTCA
CCCAACTTTT CAACGTTCCT CTCAACCTTC TCTGAACGCG AAGAGGTGCA GAAAGCCTTC
GTCCAGCAGC CGCTGAAAAT GGTCACGACC GTGGCCGGTG ATCCCGAGCC GGAGATGCAA
AAAAGCAGCC TCAGCGGCGA TCAGCTCAAT TTCCCGATCA TCCCGGATGT AGCGAAGCGA
GAGGCCCAGG GCCTGACGTT GACCGTCAAG GAAGAGCAGG GTGATCACGC CGTCGCCATC
CTGCAGAAAC CAGATACCGA TTATGTCTTC GAGTATCGGT TTGTCCGTGG ACAATGCTGG
CGGCTGGAAG AAGTGATGGA TTACTCGCTT TGA
 
Protein sequence
MNRLLSCFGV LGLIVGLSTQ PASASDPQTI GELHPPVVAS LGDQKITVFF LKNNLKGQVR 
GVHVPGAEIF YAPMNAVKPS LNYVWKVEGE QIASVFFFER KFPERAGKSM FVLTKHKVLH
EHFEGDSYSV LELPLFKDGD HLALQFFRGD LPDPELQNCL DGINREDGVE VECAYKDAAS
IKKYLADLDG RMISDSKLDQ GNRQKPLKTE GDKASVACPS PNFSTFLSTF SEREEVQKAF
VQQPLKMVTT VAGDPEPEMQ KSSLSGDQLN FPIIPDVAKR EAQGLTLTVK EEQGDHAVAI
LQKPDTDYVF EYRFVRGQCW RLEEVMDYSL