| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5556 |
|---|
| Symbol | |
|---|
| ID | 3713122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6223835 |
|---|
| End bp | 6224263 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | biopolymer transport protein ExbD |
|---|
| Protein accession | YP_351284 |
|---|
| Protein GI | 77461777 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTGC ATTTGAAAGA AGGCGCAGAC GACGATCTGG CCGAGAACCA CGAAATCAAC
GTCACGCCGT TCATCGACGT GATGCTGGTG CTGTTGATCA TCTTCATGGT GGCCGCGCCG
CTGGCCACCG TGGACATCAA GGTTGACCTG CCTGCCTCGA CCGCCAAACC GGCGCCGCGG
CCAGAGAAAC CGGTGTTCCT CAGCGTGAAG GCTGACCAGC GCCTGTTCCT GGGCGATGAC
GAAGTGAAAG CCGAAACCCT CGGCGCCGCA CTCGACGCCA AGACCCAGGG CAAGAAAGAC
ACGACGATCT TCTTCCAGGC CGACAAAGGC GTGGATTACG GCGACCTGAT GAGCGTGATG
GATAACCTGC GCGCCGCCGG TTACCTGAAG GTCGGCCTGG TCGGACTCGA GAGCGCAGTC
AAGAAATGA
|
|---|
| Protein sequence | MGLHLKEGAD DDLAENHEIN VTPFIDVMLV LLIIFMVAAP LATVDIKVDL PASTAKPAPR
PEKPVFLSVK ADQRLFLGDD EVKAETLGAA LDAKTQGKKD TTIFFQADKG VDYGDLMSVM
DNLRAAGYLK VGLVGLESAV KK
|
|---|
| |