Gene Pfl01_5555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5555 
Symbol 
ID3713121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6222875 
End bp6223828 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content65% 
IMG OID 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_351283 
Protein GI77461776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA TTCAAAACTC CGCTTCGCCA ACCAACCGAC CTCGCGCCTG GAGCGCCGTG 
GCTGCCCTGC TGCTCAGCCT GATGCTGGCG CCAGTCGCCG CCTTCGCTGA CGCACAAGCC
CCGGCCGCGC CAGCCGCCAC CGAGCAAAGC GCTCCGGCCG CCGCACCTGC CGCAACCGAC
CCGGTGCAGG CCGTAGAGGC CAGCACCGCC GACGCGCCGG AAGTCCTCGA AGCCGACAAC
ACCCTGGGCA TGGCCCACGA CCTGTCGCCA TGGGGCATGT ACCAGAACGC CGACGTGATC
GTTAAAGCCG TGATGATCGG CCTGGCCATC GCCTCGATCA TCACCTGGAC CATCTGGATC
GCCAAGGGCT TCGAGCTGAT GGGCGCCAAA CGCCGCCTGC GTGGCGAGAT CGCCGCCCTG
AAAAAAGCCG CCACCCTCAA AGAAGCCAGC GCCACCGCCG CGAAGGAAGG CACCCTCGCC
AACCTGCTGG TGCACGACGC GCTGGAAGAA ATGCGCCTGT CGACCAACGC CCGCGAGAAA
GAAGGCATCA AGGAACGCGT CAGCTTCCGC CTCGAGCGCC TGGTTGCCGC CTGTGGCCGC
AACATGAGCA GCGGCACCGG CGTTCTCGCC ACCATCGGTT CCACCGCACC GTTCGTCGGT
CTGTTCGGTA CCGTGTGGGG CATCATGAAC AGCTTCATCG GCATTGCCAA AACCCAGACC
ACCAACCTTG CCGTCGTAGC ACCGGGTATC GCTGAAGCGC TGCTGGCTAC CGCTCTGGGT
CTGGTGGCCG CGATTCCTGC CGTGGTCATC TACAACGTCT TCGCCCGCTC CATCGCCGGT
TACAAGGCTC AGGTGTCCGA TGCGTCGGCT CAGGTGCTGC TGCTGGTCAG CCGCGACCTC
GACCACCAGC CTGAGCGCAA CAGCTCGCAA CCGCACATGG TGAAAGTGGG GTAA
 
Protein sequence
MTRIQNSASP TNRPRAWSAV AALLLSLMLA PVAAFADAQA PAAPAATEQS APAAAPAATD 
PVQAVEASTA DAPEVLEADN TLGMAHDLSP WGMYQNADVI VKAVMIGLAI ASIITWTIWI
AKGFELMGAK RRLRGEIAAL KKAATLKEAS ATAAKEGTLA NLLVHDALEE MRLSTNAREK
EGIKERVSFR LERLVAACGR NMSSGTGVLA TIGSTAPFVG LFGTVWGIMN SFIGIAKTQT
TNLAVVAPGI AEALLATALG LVAAIPAVVI YNVFARSIAG YKAQVSDASA QVLLLVSRDL
DHQPERNSSQ PHMVKVG