Gene Pfl01_5553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5553 
Symbol 
ID3713119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6221025 
End bp6221765 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content64% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_351281 
Protein GI77461774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.706395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAG CGCTTGCTCT CTCGCTGCTC GCCATTTTCC TCGGCGGTTG CGCCAGCAAC 
CCTGCCGACC GTGACATCAG CGGCACCTGG ATCAATCAGG TCGCCATCGA TGCCGCTGCC
AAGGGCGGCC CCCTGCGCGA AGCGCTTCAG GCCTACGGCC CGAACCTGGA GTGGGACGTC
AACACCAAGG CCGGCCAGGC CCGCTACACC AACGGTTTTG AAAACGTGGA AGGTCGCTTG
CTCGGCGAAC AGTCCGGCGC CTGGAAAGTC GACTTCTATG GCAGCTCCGC CAGCGAGCTG
AAACGTGACG GCGGCCAACT GCAGCAAGTC GCCAATGAAA ACGAACCGGA ACAGGTCTTC
GACCGCGCGC AGATTCCGGT GCCGGAAGGC GCACCAATCG GCGCCAGCTT CGAACGCGCG
CTGTATTCCG CCTATCTGGG CGGCAACTGG ACGATCACCA GCGGCCAGGG CGAAGGCGCC
ACCGTGCAGT TCCAGGCTGA CGGCCAAGTC TCCGGCCTGC CGGGTGCCGA CCGCTATGCC
CTGTGTCTCG CCGGCGACTG CGCGTCGATG AGCAGCGGCA ACGACAGCAT GTGGTTGCAG
CAGAACGGTC AGGGCAACAA CTGGATCTTT GTGCGCAAGG GCAAGGAACT GGAAATCCTG
CAGGCCGTGA ACACGGCACT GGCGGACGAA CAACCGCAGT TCACCCCGGG TGAGCGCAAG
TGGTTGCTCG AGAAGCAGTG A
 
Protein sequence
MRKALALSLL AIFLGGCASN PADRDISGTW INQVAIDAAA KGGPLREALQ AYGPNLEWDV 
NTKAGQARYT NGFENVEGRL LGEQSGAWKV DFYGSSASEL KRDGGQLQQV ANENEPEQVF
DRAQIPVPEG APIGASFERA LYSAYLGGNW TITSGQGEGA TVQFQADGQV SGLPGADRYA
LCLAGDCASM SSGNDSMWLQ QNGQGNNWIF VRKGKELEIL QAVNTALADE QPQFTPGERK
WLLEKQ