| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5552 |
|---|
| Symbol | |
|---|
| ID | 3713118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6220572 |
|---|
| End bp | 6220952 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_351280 |
|---|
| Protein GI | 77461773 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.674901 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAA CCGTTATCAC CAGCGACAAG GCCCCGGCCG CCATCGGTAC TTACTCTCAG
GCGATCAAGG CCGGTAACAC CGTTTACATG TCGGGGCAGA TTCCCCTCGA TCCAAAAACC
ATGGAACTGG TCGAAGGCTT CGAAGCCCAG ACCGTCCAGG TGTTCGAGAA CCTGAAAGCC
GTGGCCGAAG CCGCCGGCGG TTCGTTCAAG GACATCGTCA AGCTGAACAT CTTCCTCACC
GACCTGAGCC ACTTCGCCAA GGTCAACGAG ATCATGGGCA AGTACTTCGA CCAGCCGTAC
CCGGCGCGCG CCGCCATCGG CGTGGCAGCC CTGCCAAAGG GTTCGCAGGT TGAAATGGAT
GCCATTCTGG TCATCGAGTA A
|
|---|
| Protein sequence | MTKTVITSDK APAAIGTYSQ AIKAGNTVYM SGQIPLDPKT MELVEGFEAQ TVQVFENLKA
VAEAAGGSFK DIVKLNIFLT DLSHFAKVNE IMGKYFDQPY PARAAIGVAA LPKGSQVEMD
AILVIE
|
|---|
| |