Gene Pfl01_5548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5548 
Symbol 
ID3713114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6216456 
End bp6217319 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351276 
Protein GI77461769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.395212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCACA GCATGACCGC CTTCGCCCGC GTCGAAAAAG CCGGCGTTCA GGGCACCCTG 
AGCTGGGAAC TGCGCTCGGT CAACAGCCGC TACCTGGAAC CCCACCTGCG CCTGCCTGAG
TCGTTCCGCG ACCTCGAAGG CGCCGTCCGC GAAGCCCTCC GCCAGGGCCT GTCGCGCGGC
AAACTGGAAT GCACCCTGCG CTTCACCGAG GAAAGCACCG GCAAGCCGTT GCAGGTGGAT
CGCGAGCGCG CCGCGCAACT GGTCGCCGCG GCCGAAACGG TTGCCGGCCT GATCAAGAAT
CCGGCGGCGC TGAACCCGTT GGAAGTGTTG GCCTGGCCAG GCGTACTGGT CGCCGACGCC
ACCGACCCGC AGGCGCTGAA CGCCGAGGCG CTGGCCTTGT TCAATCAGGC TCTGAAAGAC
CTCAAGGCCG GCCGCGAGCG CGAAGGCGCG GAGCTCGCCC GCCTGATCAA TGATCGCCTG
ACCTCCATCG AGGAAGATGT GGTGACCCTG CGCGAACTGG TTCCGCAGAT GCTCGCCACC
CAGCGTCAGA AAGTCCTCGA CCGCTTTGCC GACATGAAGG CCGAACTGGA CCCGCAGCGC
CTGGAACAGG AAATGGTCAT CCTCGCGCAG AAGAGCGACG TGGCCGAAGA ACTGGATCGC
CTGAGCACCC ACATCATTGA AGTTCGCCGG GTGCTGAAAT CCGGCGGGGC CGCCGGCCGG
CGCCTGGACT TCCTGATGCA AGAGCTCAAC CGCGAAGCCA ACACACTGGG CTCCAAGGCC
TTCGACCCGC GCAGCACACA GGCAGCGGTC AACCTCAAGG TGTTGATCGA GCAGATGCGC
GAACAAGTGC AGAATATTGA GTAA
 
Protein sequence
MVHSMTAFAR VEKAGVQGTL SWELRSVNSR YLEPHLRLPE SFRDLEGAVR EALRQGLSRG 
KLECTLRFTE ESTGKPLQVD RERAAQLVAA AETVAGLIKN PAALNPLEVL AWPGVLVADA
TDPQALNAEA LALFNQALKD LKAGREREGA ELARLINDRL TSIEEDVVTL RELVPQMLAT
QRQKVLDRFA DMKAELDPQR LEQEMVILAQ KSDVAEELDR LSTHIIEVRR VLKSGGAAGR
RLDFLMQELN REANTLGSKA FDPRSTQAAV NLKVLIEQMR EQVQNIE