Gene Pfl01_5540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5540 
Symbol 
ID3713630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6209174 
End bp6210397 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content64% 
IMG OID 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_351268 
Protein GI77461761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCA GACCTATGCA GCGGCTGTAT CGGAAACGCA TCGTTCTGGG CGTCGGCGGC 
GGCATTGCTG CCTACAAGAG CGCCGACCTT GTGCGCCGCC TGATCGACCA GGGCGCCGAA
GTGCGCGTGG TCATGACCCG CGGCGGCAGC GAATTCATCA CCCCGCTGAC CATGCAGGCC
CTGTCCGGCC ACCCGGTTCA CCTGGACTTG CTCGACCCGG CTGCTGAAGC CGCAATGGGC
CACATCGAAC TGGCCAAATG GGCCGATTTG GTGCTGATCG CCCCGGCGAC CGCCGACTTG
TTGGCCCGTC TGGCCCAAGG CATTGCCAAC GACCTGCTGA CCACGCTGGT GCTGGCCACC
GATGCTATCG TCGCGGTCGC TCCGGCCATG AACCAGGCCA TGTGGCGCGA CCCGGCGACC
CAGGCCAACC TGCAACTCCT TGAAAGTCGC GGCCTGAAGA CCTTCGGCCC GGCCTCCGGC
AGCCAGGCCT GCGGCGACGT CGGCATGGGC CGGATGATGG AAGCCACCGA TCTGGCGCAG
TGCGCGGCAG ACTGCTTCCA GCGTCAGGCA CTGACCGGCA AGCACGTGGT GATCACCGCC
GGCCCGACCC AGGAAAACAT CGACCCGGTG CGCTACATCA CCAACCACAG CTCCGGGAAA
ATGGGCTTTG CCCTCGCCGA AGCCGCGGTG GAAGCCGGCG CCCGTGTGAC CCTGATCAGC
GGCCCGGTGC ACCTGCCGAC GCCAGATCGC GTCACGCGCA TCGATGTGGT CAGCGCCCGC
GACATGCTGG CGGCGTGCGA ATCAGCCATC CCGTGCGATG TGTTCATCGC CTCGGCCGCG
GTGGCGGACT ACCGTCCGGA AGTCGTTGCC CCGCAAAAAC TCAAGAAAGA CCCTACAAGC
GGCGACGGCT TCGTCCTGCA AATGGTGCGT AACCCGGACA TCCTGGCCAC CATAGCGACC
CGTCCCGACC GTCCGTTCAG TGTGGGCTTC GCCGCCGAGA CCGAACACCT GCTCGACTAC
GCTGCACGCA AGCTGAAAGA CAAGAATCTC GATTTGATCG TCGCCAACGA CGTGGCCAAT
CCGAGCATCG GTTTCAACAG CGAAGAAAAC GCCTGCAGCG TGATCGACCG TGAGCTTCAC
GCCACCGTTT TCGCCCAGAC CAGCAAGAGC AAGATCGCTC GCCAACTGGT CACTTTTATC
GCCGAACGTC TGAACCAGGT TTAA
 
Protein sequence
MKGRPMQRLY RKRIVLGVGG GIAAYKSADL VRRLIDQGAE VRVVMTRGGS EFITPLTMQA 
LSGHPVHLDL LDPAAEAAMG HIELAKWADL VLIAPATADL LARLAQGIAN DLLTTLVLAT
DAIVAVAPAM NQAMWRDPAT QANLQLLESR GLKTFGPASG SQACGDVGMG RMMEATDLAQ
CAADCFQRQA LTGKHVVITA GPTQENIDPV RYITNHSSGK MGFALAEAAV EAGARVTLIS
GPVHLPTPDR VTRIDVVSAR DMLAACESAI PCDVFIASAA VADYRPEVVA PQKLKKDPTS
GDGFVLQMVR NPDILATIAT RPDRPFSVGF AAETEHLLDY AARKLKDKNL DLIVANDVAN
PSIGFNSEEN ACSVIDRELH ATVFAQTSKS KIARQLVTFI AERLNQV