Gene Pfl01_5533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5533 
Symbol 
ID3713623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6202415 
End bp6203560 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_351261 
Protein GI77461754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.316632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.720307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGGG CGACGTATTT CGCCGTGTTG GCGTCTGTCT TGAGTGTTGG CCTGGCCCTT 
GGGGTCAGCA TGCCGCTGGT GTCGTTGCGC CTGGAGAGCT GGGGCTACGG CTCGTTCGCC
ATTGGCGTGA TGGCGGCGAT GCCGGCCATT GGCGTGTTGC TGGGGGCGAA GATCTCCAGT
CATCTGGCCG CGCGTTTCGG TACGGCGAAC CTGATGCGCC TGTGCCTGTG GGCTGGGGCG
CTGTCCATCG GCCTGCTGGC GCTGCTGCCG AGCTACCCGA TCTGGCTGGT ATTGCGGCTG
ATGATCGGCG TGGTTCTGAC CATCGTGTTC ATCCTCGGCG AGAGCTGGAT CAATCAACTG
GTGGTCGAGC ACTGGCGCGG GCGACTGGTG GCACTGTATG GCAGCAGTTA TGCGTTGAGC
CAACTGTCTG GTCCATTACT GCTGGGTGCG CTTGGCACCG ATCACGATTA CGGTTTCTGG
GTGGGTGTCG GTCTGCTGAT CGCTTCGCCG TTTCTGCTGC TGGGCCGCAG TGGCGCGCCA
AGCAGCGAGG CCAGCAGCGT GACCTTCGGC GATCTGTGGG GCTTCGCTCG CGAACTGCCG
GCCATCGCCT GGGCGGTGTC TTTGTTCGCC GCATTCGAAG CAATGATCCT GACCCTGTTG
CCGGTGTATT GCCTGCAACA GGGGTTCACT GCGGAGATTG CGCTGGCGAT GGTCAGCACC
GTGGTGGTGG GCGATGCGCT GCTGCAATTG CCCATCGGTG CGCTGGCCGA TTATCTGTCA
CGGCGAACCC TGTTTACCGG TTGCGCCGTG GTATTGATGT TGTCGAGCCT GGCGATCCCG
ATGCTGCTCG ACACCTTGCT GATCTGGCCG CTGTGGGTGC TGTTCGGCGC CAGTGCCGGT
GGTCTGTTCA CGCTTTCGCT GATTCTGATC GGCGAGCGCT ACCGCGACGA TGCGCTGGTG
CGCGCCAACG CGCATGTCGC GCAGCTGTGG GGCGTCGGTT GTCTGATCGG GCCGTTGATG
GCGGGGGCTG GCAGTCAGTG GATCAGCGGG CATGCATTGC CGTGGCTGAT GGCGGCCGGG
GCGTTCGGGC TGGTGATACT GCTGTCGCGG CAAGGGGCGT TCGGCAAGGT GCCGGAGCCC
GCTTGA
 
Protein sequence
MRWATYFAVL ASVLSVGLAL GVSMPLVSLR LESWGYGSFA IGVMAAMPAI GVLLGAKISS 
HLAARFGTAN LMRLCLWAGA LSIGLLALLP SYPIWLVLRL MIGVVLTIVF ILGESWINQL
VVEHWRGRLV ALYGSSYALS QLSGPLLLGA LGTDHDYGFW VGVGLLIASP FLLLGRSGAP
SSEASSVTFG DLWGFARELP AIAWAVSLFA AFEAMILTLL PVYCLQQGFT AEIALAMVST
VVVGDALLQL PIGALADYLS RRTLFTGCAV VLMLSSLAIP MLLDTLLIWP LWVLFGASAG
GLFTLSLILI GERYRDDALV RANAHVAQLW GVGCLIGPLM AGAGSQWISG HALPWLMAAG
AFGLVILLSR QGAFGKVPEP A