Gene Pfl01_5523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5523 
Symbol 
ID3713613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6192990 
End bp6193538 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content58% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_351251 
Protein GI77461744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.22086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGTCG GTGAACGACT GCAATCGATC CGCAAGCTCA AAGGGCTTTC CCAGCGTGAA 
CTCGCCAAGC GCGCGGGCGT CACCAACAGC ACCATTTCGA TGATCGAAAA GAACAGCGTC
AGCCCTTCGA TCAGTTCGCT GAGGAAAGTT CTGGGCGGGA TTCCCATGTC CATGGTCGAG
TTCTTTTCCG AAGAAATCCT GCAGGAAAAA CCGACCCAGA TCGTCTACAA GGCCAACGAG
CTGATCGACA TTTCTGACGG CGCCGTGACC ATGAAACTGG TCGGCCGCGC GCACCCGAGC
CGGGCCATCG CGTTCCTCAA TGAAATCTAC CCGCCGGGCG CGGATACCGG CGAGGAAATG
CTCACCCACG AAGGCGAGGA AACCGGGATT CTGGTGGAAG GGCGCCTGGA GCTGGTGGTG
GGCCTTGAAA CTTTTATCCT CGAAGCCGGC GACAGCTACT ACTTTGAAAG TACCAAGCCG
CATCGTTTCC GCAATCCGTT CGATGCACCG GCGCGACTAA TCAGCGCAGC CACGCCGGCG
AATTTTTAA
 
Protein sequence
MDVGERLQSI RKLKGLSQRE LAKRAGVTNS TISMIEKNSV SPSISSLRKV LGGIPMSMVE 
FFSEEILQEK PTQIVYKANE LIDISDGAVT MKLVGRAHPS RAIAFLNEIY PPGADTGEEM
LTHEGEETGI LVEGRLELVV GLETFILEAG DSYYFESTKP HRFRNPFDAP ARLISAATPA
NF