Gene Pfl01_5520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5520 
Symbol 
ID3713786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6189628 
End bp6190200 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content60% 
IMG OID 
Productxanthine phosphoribosyltransferase 
Protein accessionYP_351248 
Protein GI77461741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.223141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAT TGCACCAGAA AATCCGCGAA CAAGGCATTG TGCTTTCCGA CCAGGTCCTG 
AAGGTCGACG CCTTCCTGAA CCACCAGATC GACCCGGCCC TGATGAAGCT GATCGGCGAC
GAATTCGCCA CGCTGTTCAA GGATTCGGGC ATCACCAAGA TTGTCACCAT CGAAGCCTCG
GGCATCGCGC CGGCGATCAT GACCGGTCTG AACCTCGGCG TGCCGGTGAT CTTCGCCCGC
AAGCAACAGT CCCTGACCCT GACTGAAAAC CTGCTGTCGG CGACCGTTTA CTCGTTCACC
AAGAAAACCG AAAGCACCGT GGCCATCTCC CCTCGCCACC TGACCAGCAG CGACCGTGTG
CTGATCATCG ACGACTTCCT GGCCAACGGT AAGGCCTCCC AGGCGCTGAT CTCGATCATC
AAGCAGGCCG GCGCCACCGT CGCGGGCCTG GGCATCGTGA TCGAGAAGTC GTTCCAGGGC
GGCCGTGCGG AGCTGGATTC GCAGGGTTAC CGCGTCGAGT CGCTGGCTCG CGTGAAGTCG
CTGAAGGATG GCGTGGTTAC CTTCATCGAG TAA
 
Protein sequence
MEALHQKIRE QGIVLSDQVL KVDAFLNHQI DPALMKLIGD EFATLFKDSG ITKIVTIEAS 
GIAPAIMTGL NLGVPVIFAR KQQSLTLTEN LLSATVYSFT KKTESTVAIS PRHLTSSDRV
LIIDDFLANG KASQALISII KQAGATVAGL GIVIEKSFQG GRAELDSQGY RVESLARVKS
LKDGVVTFIE