Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5517 |
Symbol | |
ID | 3713783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6184189 |
End bp | 6185583 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | multidrug efflux protein NorA |
Protein accession | YP_351245 |
Protein GI | 77461738 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCC CTGTGCGTAC CGAACTCTGG GCCATCCTGC GGCTGGCGGG GCCGTTGATC GCCTCGCAGT TGGCGCACAT GCTGATGGTG CTGACCGACA CCCTGATGAT GGCGCGCCTC AGTCCCGAAG CGCTGGCCGG CGGCGGTCTG GGCGCGGCGA GTTATTCGTT CGTGTCGATT TTCTGCATCG GCGTGATTGC GGCGGTTGGC ACCCTCGTGG CGATTCGTCA GGGCGCCGGC GACATCATCG GCGCCGCCCG CCTGACCCAG GCCGGGCTGT GGCTGGCGTG GCTGATGGCG CTCGGTGCCG GGCTGTTGTT GTGGAACCTG AAACCGGTGC TGTTGCTGTT CGGCCAGACC GAGACTAACG TCAACGCCGC CGGGCAATTT CTGATCGCCC TGCCGTTCGC CCTGCCCGGC TACCTGAGCT TCATGGCTCT GCGCGGTTTC ACCAGCGCCA TCGGCCGGGC GACACCGGTG ATGGTCATCA GCCTCGCCGG CACGGTGGCC AACTTCCTGC TCAATTACGC GCTGATCACC GGCATGTTCG GCCTGCCGAA ACTCGGGCTG ACCGGTATCG GCCTGGTCAC GGCGATTGTC GCCAACTGCA TGGCGCTGGC GCTGGCCTGG CATATCCGTC GGCATCCGGC CTACGACGCC TACCCGTTGC GCGAGGGTCT GTCGCGGCCA AACCGGCAGT ACCTGAAAGA ACTCTGGCGC CTGGGCCTGC CGATCGGCGG GACCTACGCG GTGGAAGTCG GGCTGTTCGC CTTCGCGGCG CTGTGCATGG GCACCATGGG CAGCACGCAA CTGGCGGCGC ACCAGATCGC CCTGCAAATC GTCTCGGTGG CGTTCATGGT GCCGGCGGGG ATGTCGTATG CGATCACCAT GCGTGTCGGC CAGCATTACG GCGCCGGGCA ATTGAGTGAT GCGCGGATGT CCGGGCGGGT CGGCATCGTC TTCGGTGCAG TGGTGATGCT GGGGTTTGCG ATGGTGTTCT GGTTGCTGCC GAATCAGTTG GTCGGTTTGT TCCTCGACCA TAACGACCCG GCGTTTGCCG AAGTGATTCG TCTGGCCGTG AGCCTGCTGG CCGTGGCGGC CTGGTTCGAG CTGTTCGACG GCACGCAGAC GATTGCCATG GGCTGCATCC GCGGGCTCAA GGATGCCAAG ACCACATTCC TGGTCGGGCT TGTTTGCTAC TGGCTGATCG GCGCGCCGGC GGCGTGGCTG ATGGCGTTTC ATCTGCACTG GGGGCCGACC GGCGTCTGGT GGGGTCTGGC GCTGGGGCTG GCCTGTGCGG CGGTGAGCTT GACGCTGGCG TTCGAATGGA AGATGAAGCG AATGATTCGG CTTGAGCCGC AATCTCAAGG TTTCAAGATC GCTCAGCCGG AATGA
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Protein sequence | MQRPVRTELW AILRLAGPLI ASQLAHMLMV LTDTLMMARL SPEALAGGGL GAASYSFVSI FCIGVIAAVG TLVAIRQGAG DIIGAARLTQ AGLWLAWLMA LGAGLLLWNL KPVLLLFGQT ETNVNAAGQF LIALPFALPG YLSFMALRGF TSAIGRATPV MVISLAGTVA NFLLNYALIT GMFGLPKLGL TGIGLVTAIV ANCMALALAW HIRRHPAYDA YPLREGLSRP NRQYLKELWR LGLPIGGTYA VEVGLFAFAA LCMGTMGSTQ LAAHQIALQI VSVAFMVPAG MSYAITMRVG QHYGAGQLSD ARMSGRVGIV FGAVVMLGFA MVFWLLPNQL VGLFLDHNDP AFAEVIRLAV SLLAVAAWFE LFDGTQTIAM GCIRGLKDAK TTFLVGLVCY WLIGAPAAWL MAFHLHWGPT GVWWGLALGL ACAAVSLTLA FEWKMKRMIR LEPQSQGFKI AQPE
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