Gene Pfl01_5517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5517 
Symbol 
ID3713783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6184189 
End bp6185583 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content65% 
IMG OID 
Productmultidrug efflux protein NorA 
Protein accessionYP_351245 
Protein GI77461738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCC CTGTGCGTAC CGAACTCTGG GCCATCCTGC GGCTGGCGGG GCCGTTGATC 
GCCTCGCAGT TGGCGCACAT GCTGATGGTG CTGACCGACA CCCTGATGAT GGCGCGCCTC
AGTCCCGAAG CGCTGGCCGG CGGCGGTCTG GGCGCGGCGA GTTATTCGTT CGTGTCGATT
TTCTGCATCG GCGTGATTGC GGCGGTTGGC ACCCTCGTGG CGATTCGTCA GGGCGCCGGC
GACATCATCG GCGCCGCCCG CCTGACCCAG GCCGGGCTGT GGCTGGCGTG GCTGATGGCG
CTCGGTGCCG GGCTGTTGTT GTGGAACCTG AAACCGGTGC TGTTGCTGTT CGGCCAGACC
GAGACTAACG TCAACGCCGC CGGGCAATTT CTGATCGCCC TGCCGTTCGC CCTGCCCGGC
TACCTGAGCT TCATGGCTCT GCGCGGTTTC ACCAGCGCCA TCGGCCGGGC GACACCGGTG
ATGGTCATCA GCCTCGCCGG CACGGTGGCC AACTTCCTGC TCAATTACGC GCTGATCACC
GGCATGTTCG GCCTGCCGAA ACTCGGGCTG ACCGGTATCG GCCTGGTCAC GGCGATTGTC
GCCAACTGCA TGGCGCTGGC GCTGGCCTGG CATATCCGTC GGCATCCGGC CTACGACGCC
TACCCGTTGC GCGAGGGTCT GTCGCGGCCA AACCGGCAGT ACCTGAAAGA ACTCTGGCGC
CTGGGCCTGC CGATCGGCGG GACCTACGCG GTGGAAGTCG GGCTGTTCGC CTTCGCGGCG
CTGTGCATGG GCACCATGGG CAGCACGCAA CTGGCGGCGC ACCAGATCGC CCTGCAAATC
GTCTCGGTGG CGTTCATGGT GCCGGCGGGG ATGTCGTATG CGATCACCAT GCGTGTCGGC
CAGCATTACG GCGCCGGGCA ATTGAGTGAT GCGCGGATGT CCGGGCGGGT CGGCATCGTC
TTCGGTGCAG TGGTGATGCT GGGGTTTGCG ATGGTGTTCT GGTTGCTGCC GAATCAGTTG
GTCGGTTTGT TCCTCGACCA TAACGACCCG GCGTTTGCCG AAGTGATTCG TCTGGCCGTG
AGCCTGCTGG CCGTGGCGGC CTGGTTCGAG CTGTTCGACG GCACGCAGAC GATTGCCATG
GGCTGCATCC GCGGGCTCAA GGATGCCAAG ACCACATTCC TGGTCGGGCT TGTTTGCTAC
TGGCTGATCG GCGCGCCGGC GGCGTGGCTG ATGGCGTTTC ATCTGCACTG GGGGCCGACC
GGCGTCTGGT GGGGTCTGGC GCTGGGGCTG GCCTGTGCGG CGGTGAGCTT GACGCTGGCG
TTCGAATGGA AGATGAAGCG AATGATTCGG CTTGAGCCGC AATCTCAAGG TTTCAAGATC
GCTCAGCCGG AATGA
 
Protein sequence
MQRPVRTELW AILRLAGPLI ASQLAHMLMV LTDTLMMARL SPEALAGGGL GAASYSFVSI 
FCIGVIAAVG TLVAIRQGAG DIIGAARLTQ AGLWLAWLMA LGAGLLLWNL KPVLLLFGQT
ETNVNAAGQF LIALPFALPG YLSFMALRGF TSAIGRATPV MVISLAGTVA NFLLNYALIT
GMFGLPKLGL TGIGLVTAIV ANCMALALAW HIRRHPAYDA YPLREGLSRP NRQYLKELWR
LGLPIGGTYA VEVGLFAFAA LCMGTMGSTQ LAAHQIALQI VSVAFMVPAG MSYAITMRVG
QHYGAGQLSD ARMSGRVGIV FGAVVMLGFA MVFWLLPNQL VGLFLDHNDP AFAEVIRLAV
SLLAVAAWFE LFDGTQTIAM GCIRGLKDAK TTFLVGLVCY WLIGAPAAWL MAFHLHWGPT
GVWWGLALGL ACAAVSLTLA FEWKMKRMIR LEPQSQGFKI AQPE