| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5508 |
|---|
| Symbol | |
|---|
| ID | 3713774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 6172892 |
|---|
| End bp | 6174385 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Mg chelatase-like protein |
|---|
| Protein accession | YP_351236 |
|---|
| Protein GI | 77461729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.132191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTCG CCATCGTCCA CAGCCGCGCC CAGATAGGCG TGGATGCCCC CGCCGTCACC
GTCGAAGTTC ACCTGGCCAA CGGCTTGCCC TCGCTGACCA TGGTCGGCCT GCCCGAAGCG
GCAGTGAAGG AGAGCAAGGA CCGGGTGCGC AGTGCGATCA TCAATTCCGG GCTGCAGTTT
CCGGCGCGGC GGATCACCTT GAATCTGGCG CCGGCGGATC TGCCCAAGGA TGGCGGGCGG
TTCGATCTGG CGATTGCGCT GGGAATTCTG TCGGCGAGTG TGCAGGTGCC GACGTTGACC
CTGGATGACG TGGAATGCCT GGGTGAGCTG GCGTTATCCG GTGCAGTGCG GGCGGTGCGT
GGGGTGTTGC CAGCGGCGCT GGCGGCGCGC AAGGCAGGGC GGACGCTGGT GGTGCCGCGG
GCGAATGCCG AGGAGGCGTG TCTGGCGTCA GGACTGAGGG TGATCGCAGT GGATCATCTG
CTGGAGGCTG TGGCGCATTT CAACGGGCAT ACACCGGTCG AGCCTTATGT CTCGGATGGG
TTGATCCATG CCGCCAAACC CTATCCCGAC TTGAATGAGG TACAGGGCCA ACTGGCCGCC
AAACGGGCGC TGCTGATTGC CGCCGCCGGT GCGCACAATC TGCTGTTCAG CGGGCCACCG
GGGACGGGCA AGACGTTGCT GGCCAGCCGA TTACCGGGAT TGCTGCCACC GCTGGCCGAG
AGTGAAGCGC TGGAAGTGGC GGCGATTCAA TCCGTCGCCA GCGGCGCACC GTTGACCCAC
TGGCCGCAGC GCCCGTTCCG CCAACCGCAT CACTCGGCCT CCGGGCCGGC ATTGGTCGGC
GGCAGTTCAA AACCGCAACC CGGTGAAATC ACCCTCGCCC ATCACGGCGT GCTGTTTCTC
GATGAGCTAC CCGAGTTTGA TCGCAAGGTG TTGGAGGTTC TGCGCGAACC GCTGGAATCC
GGCTGCATCG TGATCGCAAG GGCCAAGGAA CGGGTGCGGT TTCCCGCGAG ATTCCAGCTG
GTCGCGGCGA TGAACCCCTG CCCCTGTGGA TATCTTGGCG AACCGAGCGG CAAGTGCTCG
TGCACGCCGG ACATGGTGCA GCGCTATCGC AACAAACTGT CGGGGCCGTT GCTGGACCGG
ATCGATTTGC ACCTGACGGT GGCGCGGGAG GCCACAGCGT TGAACCCTGC GGTGAAACCG
GGAGAGGACA GCGCCAGCGC GGCCACGCGG GTCGCCGAGG CCCGCGAGCG TCAGCAAAAA
CGTCAGGGCT GTGCCAATGC GTTTCTCGAT TTGCCGGGGC TGAAGAAGCA CTGCAAGTTA
TCCACAGCCG ATGAAACCTG GCTGGAGTCA GCCTGTGAGC GACTGACCCT GTCGCTGCGT
TCAGCACATC GGCTGCTCAA GGTTGCACGG ACACTGGCCG ATATAGAGAA GGTTGATGCC
ATATCACGTG AGCATCTGGC CGAAGCGCTG CAATATCGCC CAGCGACGCA ATGA
|
|---|
| Protein sequence | MSLAIVHSRA QIGVDAPAVT VEVHLANGLP SLTMVGLPEA AVKESKDRVR SAIINSGLQF
PARRITLNLA PADLPKDGGR FDLAIALGIL SASVQVPTLT LDDVECLGEL ALSGAVRAVR
GVLPAALAAR KAGRTLVVPR ANAEEACLAS GLRVIAVDHL LEAVAHFNGH TPVEPYVSDG
LIHAAKPYPD LNEVQGQLAA KRALLIAAAG AHNLLFSGPP GTGKTLLASR LPGLLPPLAE
SEALEVAAIQ SVASGAPLTH WPQRPFRQPH HSASGPALVG GSSKPQPGEI TLAHHGVLFL
DELPEFDRKV LEVLREPLES GCIVIARAKE RVRFPARFQL VAAMNPCPCG YLGEPSGKCS
CTPDMVQRYR NKLSGPLLDR IDLHLTVARE ATALNPAVKP GEDSASAATR VAEARERQQK
RQGCANAFLD LPGLKKHCKL STADETWLES ACERLTLSLR SAHRLLKVAR TLADIEKVDA
ISREHLAEAL QYRPATQ
|
|---|
| |