Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5501 |
Symbol | xerC |
ID | 3713825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6167295 |
End bp | 6168194 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_351229 |
Protein GI | 77461722 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.345753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACGGC AACTGGACGC TTACTGCGAA CACCTGCGCA GTGAGCGGCA GGTGTCGCCG CATACGCTGT CGGCCTACCG GCGCGATCTC GATAAAGTCC TCGGCTGGTG CATCAAACAG AACATCGGCA GCTGGCAGGC GCTCGACATC CAGCGCCTGC GCAGCCTGAT CGCCCGCCTG CATGCCCAAG GCCAGTCCTC GCGCAGTCTG GCCCGCCTGC TCTCGGCGGT GCGCGGGCTC TATCACTATC TGAATCGCGA ATGTCTCTGC GATCACGATC CCGCAACGGG TCTCGCACCA CCGAAAGGTG AACGTCGCCT GCCGAAAACC CTCGATACCG ACCGAGCGCT GCAACTGCTC GAAGGCGCAG TCGAGGACGA CTTTCTGGCC CGGCGCGATC AGGCGATTCT GGAATTGTTC TATTCCTCCG GCCTGCGGCT GTCGGAGCTG ACCGGGCTCA ATCTCGATCA GCTCGATCTG GCCGACGGCA TGGTCCAGGT GCTCGGCAAG GGCAGCAAGA CACGCCTGCT GCCCGTCGGC AAAAAGGCTC GGGAAGCGCT GGAGCAATGG CTGCCGCTGC GGGCGCTGAC CAACCCGTCG GACGACGCCG TGTTCGTCAG CCAGCAAGGC CGCCGCCTCG GCCCGCGAGC GATTCAGGTG CGGGTCAAAC TGGCGGGCGA GCGCGAACTG GGGCAGAACC TGCACCCGCA CATGCTGCGG CACTCCTTCG CCAGCCATTT GCTCGAGTCC TCCCAGGACC TGCGTGCGGT GCAGGAACTG CTCGGCCACT CGGACATCAA GACCACCCAG ATCTATACCC ACCTGGACTT CCAGCACCTG GCGGCGGTCT ATGACAGCGC CCATCCACGG GCCAAACGCA TGAAAGGCGA TGATTCATGA
|
Protein sequence | MERQLDAYCE HLRSERQVSP HTLSAYRRDL DKVLGWCIKQ NIGSWQALDI QRLRSLIARL HAQGQSSRSL ARLLSAVRGL YHYLNRECLC DHDPATGLAP PKGERRLPKT LDTDRALQLL EGAVEDDFLA RRDQAILELF YSSGLRLSEL TGLNLDQLDL ADGMVQVLGK GSKTRLLPVG KKAREALEQW LPLRALTNPS DDAVFVSQQG RRLGPRAIQV RVKLAGEREL GQNLHPHMLR HSFASHLLES SQDLRAVQEL LGHSDIKTTQ IYTHLDFQHL AAVYDSAHPR AKRMKGDDS
|
| |