Gene Pfl01_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5500 
Symbol 
ID3713824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6166567 
End bp6167292 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351228 
Protein GI77461721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA AGCCTCAGGT ACCCGCCCGA CAGTCCGGTG AATCAGCGTC CGAGAGCCTG 
GAGGCGGCAG CAGTTGCCGC GTACCTGGAG GCTCATCCGG ACTTCTTCGT CGAACATGAA
GAACTGTTGC CGTCCCTGCG CATCCCCCAT CAGCGCGGCG ATACCGTCTC GCTGGTCGAG
CGCCAGATGG CCATCCTGCG CGACCGCAAC ATCGAGATGC GTCATCGCCT CTCGCATTTG
ATGGACGTCG CCCGGGACAA CGATCGCCTG TTCGACAAGA CCCGTCGCCT GATCCTTGCA
CTGATGGACG CTGCCACCCT GGAAGACGTG GTGATCAGCG TCGAAGACAG CCTGCGCCAG
GATTTCCAAG TGCCCTTCGT CAGCCTGATC CTGCTCGGCG ACAACCCGGC CCCGGTCGGC
CGCTGGGTGA CCCACGCCGA CGCGCAAACC GCCATCGGCG GATTGCTCAC TGAAGGCAAG
AGCGTCAGCG GCAGCCTGCG CGAACATGAA CTGGACTTCC TGTTCGGCGA AGAGCAGCGC
AAGCAGATCG GCTCCACCGC CGTGGTCGCC GTCAGCCACC AGGGCATCCA CGGAATCCTG
GCCATCGCCA GCCGTGACCC GCAGCACTAC AAGAGTTCGG TCGGCACGCT GTTCCTCAGC
TACATCGCCG AAGTCATGGG TCGCGTGCTG CCACGGGTCA ACAGCTCCCT GCGCTCGGTA
CGCTGA
 
Protein sequence
MTDKPQVPAR QSGESASESL EAAAVAAYLE AHPDFFVEHE ELLPSLRIPH QRGDTVSLVE 
RQMAILRDRN IEMRHRLSHL MDVARDNDRL FDKTRRLILA LMDAATLEDV VISVEDSLRQ
DFQVPFVSLI LLGDNPAPVG RWVTHADAQT AIGGLLTEGK SVSGSLREHE LDFLFGEEQR
KQIGSTAVVA VSHQGIHGIL AIASRDPQHY KSSVGTLFLS YIAEVMGRVL PRVNSSLRSV
R